Gene Bphyt_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1489 
Symbol 
ID6280774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1665993 
End bp1666844 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content64% 
IMG OID642621054 
ProductABC transporter related 
Protein accessionYP_001895127 
Protein GI187923485 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGG TCGACAAGTT GCGTATCGTG CAGCGCGCCG CGGCAAACGG CGCGGCAATT 
CATCCACTGA ACAAGGACGA GACAGCGCCC GCGCTGATCT CGGTCGAGCA GGCGGGCAAG
CGTTTTGCCG CGCGCGGCGG CGCGCAAGCG TTCAGCGCGC TCGAAGGCGT CTCGATGCAG
ATTCGCGAGA GCGAATTCGT TTCGATTCTC GGGCCGAGCG GTTGCGGCAA GAGCACCTTG
CTGCGCATGG TCGCGGGGCT CGTGCCCTGC GACGAAGGCC GTATTCTCCT CGGCGCCGAA
CCGATCGGCG CGCCGGTGCC GGACATCGGC GTGGTGTTTC AGACCAGCAA TCTGCTGCCG
TGGCTGAGCG TCGGCGCCAA TATCCGGCTC GGTGCGAAAT TGCGCAATCT GCCGCGCGCG
CAGGTGGATC AGCGGCTTCC CGCCTTGCTC GAAACCTTGG GTCTGACGGC ATTCGCCGAT
CGCTATCCGC ATGAGTTGTC GGGCGGCATG CGGCAGCGCG CCGCGATCGG GCAGATTCTG
TTGCTCGAGC CACGCGTGAT GCTGATGGAC GAACCCTTCG GCGCGCTGGA CGCGCTCACG
CGCGACCGCC TGAATGTCGA GTTGCTGAGA ATCTGGCAGC AGAGCACGCT CACCGTGTTG
CTGGTCACGC ATAGCATCCA CGAGGCGGTG TTTCTGTCGG ATAGGGTGCT GGTGATGTCC
GAACGCCCCG GCCGCGTGAT TCACGACGTC AAGATCGATC TGCCGCGGCC GAGACAACCC
GATCAGGTGA AAAGCGATCC GCTATACGGC GAGTACGTTT CGCAGTTGTC GAAACTGATG
GGGGTGTTCT AG
 
Protein sequence
MALVDKLRIV QRAAANGAAI HPLNKDETAP ALISVEQAGK RFAARGGAQA FSALEGVSMQ 
IRESEFVSIL GPSGCGKSTL LRMVAGLVPC DEGRILLGAE PIGAPVPDIG VVFQTSNLLP
WLSVGANIRL GAKLRNLPRA QVDQRLPALL ETLGLTAFAD RYPHELSGGM RQRAAIGQIL
LLEPRVMLMD EPFGALDALT RDRLNVELLR IWQQSTLTVL LVTHSIHEAV FLSDRVLVMS
ERPGRVIHDV KIDLPRPRQP DQVKSDPLYG EYVSQLSKLM GVF