Gene Bphyt_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1486 
Symbol 
ID6282815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1663509 
End bp1664576 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content65% 
IMG OID642621051 
ProductNMT1/THI5 like domain protein 
Protein accessionYP_001895124 
Protein GI187923482 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAGC GGATACGACG CGCAGTGGCG CGGAGAGTGT CGGAACTCAC ACGGCGCACG 
GCGTTGAGCG CTGCCGCGCT CGCCGCCGCG ACGCTCTTTA CCGGCGTCCA CGCGGCCGCT
CAAACGACGG ATAAGCCCGC CGCGCGGGTT GCGGACAAGG TGCGCGTGAA TCTGGCGTGG
CTGCCGCAGG GCAGCACGGG CGGCATTCTG CTCGCTCACG CCAAGGGCTA CTACCGCGAG
GCAGGGCTCG ATGTCAGCGT GATGCGCGGC TATGGCGGCC AACGCACCGT CAATGAAGTG
GATGGCGGTC TGTTCGAGTT CGGCTACGGC GATCCCGTGA GCGTGATGCT GAATCGCGCG
CACGGCGGCC ATGCCGTGAT GGTCGGCGCG ATCAACACGC GCTGGCCCGG TGCGATGTGT
TATCTGGAAC GGCCCGGTTT CAAGGTGAGC TCGCTGAAGG ATCTCGCCGG TATGACGCTG
GGTGGCGGCG GCGCGTCGCC GGTGCAGAAC ATCATGCCGG CCTGGCTGAA GCAGAACGGC
ATGGCACCCG ATGCGATCAA GACGGTTCGG CTCGATCCGG CGGTGATCAA CACCGCGTTA
TTGCAAAAGC GCATCGACCT GTCCGAGTGC TGGGAAGGCG CGAGCCTGCC GGTGCAGGCC
GCGCTGGTGA AGCGGGCAGG GCAGCAACTC GGCAAGGTGT ATTACCGCGA TTTCGGTCTG
GACATGATGG GCAACGGTAT CGTCACCACG GACAGTTTCG TGGCCCAACA TCCGGACGTG
GTCAAGCGCT TTGTGGCCGC CACCTATCGC GGCTATGCGC TGATGCGCGA GCATCCGCAG
GAAGCCGCCG ACGCGATCGC GGCGCAATAT CCCGTGCTCG ACAAGACGAT TCTGTTGCAG
CAGATCGTCG AGACCAACGG CCTGATCACC GACGACCCCG CGCAACACAA GACCGGCTGG
TTGCGCCCGG CACGCATGGA CGCCACCGCG GCGTTCGTGT CGCAAGCGTT CGGCACCGGC
GCGAAGGTGA AGGCGGCCGA CCTTTATACG AACCGGTTTG TGGAATGA
 
Protein sequence
MLQRIRRAVA RRVSELTRRT ALSAAALAAA TLFTGVHAAA QTTDKPAARV ADKVRVNLAW 
LPQGSTGGIL LAHAKGYYRE AGLDVSVMRG YGGQRTVNEV DGGLFEFGYG DPVSVMLNRA
HGGHAVMVGA INTRWPGAMC YLERPGFKVS SLKDLAGMTL GGGGASPVQN IMPAWLKQNG
MAPDAIKTVR LDPAVINTAL LQKRIDLSEC WEGASLPVQA ALVKRAGQQL GKVYYRDFGL
DMMGNGIVTT DSFVAQHPDV VKRFVAATYR GYALMREHPQ EAADAIAAQY PVLDKTILLQ
QIVETNGLIT DDPAQHKTGW LRPARMDATA AFVSQAFGTG AKVKAADLYT NRFVE