| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1480 |
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| Symbol | |
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| ID | 6282809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1658022 |
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| End bp | 1658966 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642621045 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001895118 |
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| Protein GI | 187923476 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCA CCTATGTGCT CGCGCTGATC CCGCTGCCCG ACGCGACGCT CGATGCGCTG
CGGCGCGCTT ACGCGCTGCA TTACCTGCCG GATGGCTGGC CTGAAACGTG GCCCGCCGGC
GTCGACCTGA CCAGGGTGCG CGCGGTCGTG ACCAACGGCT CGACCGGTTT GTCCGAAGCG
CGGATGGCTG CGCTGCCGGC GCTCGAGATC GTCAGCGCGT TCGGGGCGGG CTACGAAAAC
GTCGATGTCG CCGCGGCCGC GCGACGCGGC ATCGTGGTCA CGCATGCGCC CGGCGCGAAT
GCGGCAACCG TCGCCGATCA CGCCATCGGT CTGCTGCTCG CGCTCGCGCG CGGCTATGCG
CCGCTCACCG AGGCGGTGCG CGGCGGCAAC TGGCGCACGT CGCGCGGCGA GCGTGCCACG
CTGACGGGCG CGCGGCTCGG GATAGTCGGC ATGGGCCGCA TCGGCAGATT GATCGCGGCG
CGCGCACGGG GCTTCGACAT GACGCTCGGT TATCACACGC GCGGTCCGCA TGCCGACGCA
CCCGGCCGCT ACTACAGCCG GCTCACGGAA CTCGCCGCCG CCAGCGACTT TCTCGTGATC
GCCTGCAACG GCGGTCCGGC GACAAAGCAT CTGGTCGATC GCGAGGTCTT GTACGCGCTC
GGGCCGCACG GCTACGTGGT GAATGTTTCG CGCGGTTCGG TACTCGACAC GCGAGCCTTG
CTCGACGCGC TGGCGGAGCG CGCGATTGCA GGCGCGGGGC TCGACGTGAT CGAGCACGAA
CCGGAGGTGC CGTTCGAGTT GCTCGACCAT CCCGATGTGC TCGTCACACC GCATATCGCG
GGACGCTCGC CTGCCTCGCT GATCGCACAA CGCGACGCGT TGATCGCCAG CCTGACCCAG
CACTTCACGC ACACACCCGT CGAATTCGCA GTGCGCACTG TTTGA
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| Protein sequence | MSATYVLALI PLPDATLDAL RRAYALHYLP DGWPETWPAG VDLTRVRAVV TNGSTGLSEA
RMAALPALEI VSAFGAGYEN VDVAAAARRG IVVTHAPGAN AATVADHAIG LLLALARGYA
PLTEAVRGGN WRTSRGERAT LTGARLGIVG MGRIGRLIAA RARGFDMTLG YHTRGPHADA
PGRYYSRLTE LAAASDFLVI ACNGGPATKH LVDREVLYAL GPHGYVVNVS RGSVLDTRAL
LDALAERAIA GAGLDVIEHE PEVPFELLDH PDVLVTPHIA GRSPASLIAQ RDALIASLTQ
HFTHTPVEFA VRTV
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