| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1478 |
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| Symbol | |
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| ID | 6284108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1655667 |
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| End bp | 1656707 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642621043 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001895116 |
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| Protein GI | 187923474 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA AGACTCTCGT GTCAGGCGCC TTGATGCTCG CATGCGCCGG GGCACATGCC
CAGTCGAAGA TCTGGCTGTC CGGCTATGTC GACCTGAACA TCGAACATCT GATCTCTTCC
GGTTCTGGCG GCAACGTGAC GCGCATGTCG AGCGGCGGCC TGAACAACTC GCGCTTCAAC
CTGAGCGGTG TCGAAGACCT GGGCGGCGGC AACAAGGCCG TGTTCACCAT CGAGCCGATG
TTCTCCGCGA ACACCGGTGT GCAGTCCGCG CAATTTCGCC AGTCGTTCGT CGGCCTGAAA
GGCAACTGGG GTGAAATCAC GATGGGCCGC CAGTTCACGC CCTCGTACTG GATCGCGGGT
TACGCCGATC CGAGCTGGGC AGCGGACTTC AGTATGGTCA ACAACATGGA GTTCTTTTAC
GCGTCGTACC GCGTGGACAA CGCGATCCAG TATAAGACGC CGACCTTCTA CGGCTTCACC
GGCCGGATCA TGGCGACCAC CGGTGTCGGC GACAGCACGC GCGCGGGACG CTTCCTCAGC
ACCAGCATCG ACTACCGGCA TGGGCCGATC TTCATCGGCG CCGTCAGCGA GTTGCAGTAC
ACGCGGGATA TCTTCAGGTC CTCGCAGATC CACTCGTCGC GCGACAACTA TTTCTCCGCC
GTCTACAAGT TCGGCGGCTT CGAGCCGACG GTGATCTATC ACACGTACAA CGGCTATTAC
GCGTTTCCGC CCTACGTCGC GTTCAATTCG CAGGGTTGGG ATGCGCAGAT CGGCGCGCGC
TGGAACATCG ACGGACGCAA CCGTGTGTAC CTGAGCGTGG TGCATCGCCA CGACGACAAC
AACACCAGTA TTTCCAGCGC CACCGGCGGC GTGATCGGCT ACATCTACGG TTTGTCGAAA
CGGACCGACC TGTATGCCAC TTTCGCGCAC GTCAAACATC AGCACGACGT GCCCGTGCCT
TATCCGGTGA CGTTCCAGGT TTATCCGAAC AGTGGACAGA ATCCGAGCGG CTTCCAGTTC
GGTATTCGAC ACGCGTTCTA A
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| Protein sequence | MKTKTLVSGA LMLACAGAHA QSKIWLSGYV DLNIEHLISS GSGGNVTRMS SGGLNNSRFN
LSGVEDLGGG NKAVFTIEPM FSANTGVQSA QFRQSFVGLK GNWGEITMGR QFTPSYWIAG
YADPSWAADF SMVNNMEFFY ASYRVDNAIQ YKTPTFYGFT GRIMATTGVG DSTRAGRFLS
TSIDYRHGPI FIGAVSELQY TRDIFRSSQI HSSRDNYFSA VYKFGGFEPT VIYHTYNGYY
AFPPYVAFNS QGWDAQIGAR WNIDGRNRVY LSVVHRHDDN NTSISSATGG VIGYIYGLSK
RTDLYATFAH VKHQHDVPVP YPVTFQVYPN SGQNPSGFQF GIRHAF
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