Gene Bphyt_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1466 
Symbol 
ID6282497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1644639 
End bp1645460 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID642621032 
Product4-oxalocrotonate decarboxylase 
Protein accessionYP_001895105 
Protein GI187923463 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID[TIGR03220] 2-oxopent-4-enoate hydratase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAT TGGACCTGAA CGCCGTGCAA CGAATCGCCG ACGCGCTGTG GCGGGCGCAG 
CAAACCGGCG TGCCCGTCGC ACCGGTTCGC AACGCGATCG CGGAACTCGG CGGCGATGCG
CTCGACGCGG CCTACGCGGT GCAGCGCGTG AATACCGAGC GCCAGTTGGC CGCCGGCCGC
CGCCTGGTGG GCCGCAAGAT CGGCCTCACG TCAAAGGCCG TGCAGACGCA ACTCGGCGTC
GATCAACCGG ACTTCGGCAT GTTGTTCGAC GACATGTCGA TTGCGGACGG CGAGGAGATC
GCGCTGTCGC GCACGCAGCA GCCGAAGGTG GAGGCGGAGA TCGCGCTGGT GCTCGCGCGC
GATTTGCCGC ACGAACGCAA CACGATCGCC GATCTGATCG GCGCGACGGC TTACGCGTTG
CCCGCCATCG AAATCGTCGG CAGCCGCATT GCCAACTGGG ATATCCGCCT GACCGATACG
GTGGCCGATA ACGCATCCAG CGGTCTCTTC GTGCTCGGCA ACCGGCCCGT CAAACTCGGC
GCGTTCGACA TCGTCCACTG CGGTATGGCG ATGGAGCGTC GCGGCGATCC GGTGAGCGTG
GGCGTGGGCG CGGCATGCCT GGGCAATCCG CTGTATGCGG CAGTGTGGCT TGCCAACACG
ATGACGCGTG TCGGCGCGCC GCTCAAAGCA GGCGACATCG TGCTCACGGG CGCGCTCGGA
CCCATGGCGG CCGTGCAGGC CGGCGACGTC TTTACCGCCC ATATCGAAGG ACTCGGCTCC
GTAAGCGCGA GCTTCGCTCA TCACTCTGAA TCCACGTCGT GA
 
Protein sequence
MSGLDLNAVQ RIADALWRAQ QTGVPVAPVR NAIAELGGDA LDAAYAVQRV NTERQLAAGR 
RLVGRKIGLT SKAVQTQLGV DQPDFGMLFD DMSIADGEEI ALSRTQQPKV EAEIALVLAR
DLPHERNTIA DLIGATAYAL PAIEIVGSRI ANWDIRLTDT VADNASSGLF VLGNRPVKLG
AFDIVHCGMA MERRGDPVSV GVGAACLGNP LYAAVWLANT MTRVGAPLKA GDIVLTGALG
PMAAVQAGDV FTAHIEGLGS VSASFAHHSE STS