| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1447 |
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| Symbol | |
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| ID | 6281701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1620522 |
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| End bp | 1623266 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642621013 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001895086 |
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| Protein GI | 187923444 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA GGGCATTGGC GCTGGCCATT AGAAGAATAG TCTGGGCTGA ACTGGCGTTG
TCGGCCGTGA TCGCCGTACC GGCGTTTGCG CAAAGCCAGC CGGCCACCAC CGGCACCGCG
GCAGGCGCGA CGACAACGGA AAGCACCCCG GCAACGGGCG CGGCTGCCAC ACCGTCCGCG
GATGGCAACA CCGCCACGCC GACGGGCAAA GGGGTCCAGC AACTCAAGAA ATTCGAGGTG
ACCGGGTCGC TGATCCGCAC GTCGGACAAG GTCGGCAACA CGGAAGTTCA GACCATCACG
ACCAAGGACA TCCAGCAAAG CGGTTATACG ACCGTGGCCG ACTTCCTGCG CGGCACCTCC
GCCAACTCGG GGAGCAGCTG GGGCCAAACG ACAATGAATA GCTCCGCGCA AGGCGGCGGC
GGTATTGCAT TGCGCGGTCT GAGCGAGAAG TACACCCTGG TGCTGGTGGA CGGGCAACGG
GTGGCGAATT ACGGCAAGGC GGTGAACTTC ACCGACACGT TCTTCGACGT GAATTCGATC
CCGCTCAACA TGATCGACCA CATCGACATC GTGAAGACCG GTGCGGTCTC GGTGTATGGT
TCGGATGCAA TCGCGGGCGT GGTCAACATC ATCACCAAGA AAGACTTCCA GGGCTTGCAG
ATCGACGGCC AGCTCGGCAA GGCTCAGCAT CCGGGCGACG CGCAGGGCAA TTTCAGCGTG
CTCGGCGGTA TCGGCGATCT GAATGGCGAC CGCTTCAACG TAACGGCCGC CGCGAGCTAC
TACCGCGACA CCGGCTCGTC GCTCGGCGAT CGCGACATGA CCGCGGGTCA GGACTTCAGC
CAGTTCCCGG GTGGTCTCGC GGGCCCGCTC GGCCCGAACC AGCAATCGTA CTGGACTACG
GCCGACGGCA CTAACACGGC ACTCAGCCCC TGTCCTCCAG GCAGCGTGTC GGCGAACGGC
GCATCCACGT GTAAATCGAA TCCGGCCAGC GCCACTTCGC TGGTGCCGGC AATCACGCGC
CTGAACGCGA AAGTGCGCGG TACGTTCAAG ATCAACGACG ACGTGCAGGC CTACGCCGAC
TTCTGGGTGA GCCGCGACGA AACCGTGCAG AACGAAGGCC CGGCAGTGCT GAGCAGCCAG
ACCAACGCGT TCAACCCGGC CACCGGTTCC GCGTTGCCGC TGTCGCGCAC GGTCTCGGGC
ACCAATCCGT ACAACCCGTT CGGCGTACCC ACGCAGATCA ACTATACGTT CCCGAATACC
GTGTCGGCGG ATACGGTGTC GACGTTCTGG CGTGCATTGA CCGGTGTGAA AGGCTCGTTC
ACCACCGCCA AATTCGGCGA TTGGGATTGG TCCGCGGATT ACGGCCACTC GCAGAGCACG
GTCGACACGA CCTACGGCAA CGCGCTGAAT GTTGCGGGCC TCGAGAACAT TCTGCAGAAC
GGCGTGTTCA ACTTTTCGAA TCCGTCGGCC ACGCCGAACG GTTTGAACGG CGTCTTCCAG
AACGACTATG AACAGGCGAT CTCGAAGCTC GACAGCGTCA CGGCGAAGAC CTCGACGAGC
AACCTGTTCA CTCTGCCGGG CGGCCCGGTC GGTGTCGGTT TCGGTACGGA ATTCCGTCAT
GAAAGCAACA TCATCAACTC GCGTACGTAT AGCGCGCTCG GCATTACGGC GCCGGCCAAC
GTGCAAACGG TCGACGGTGA GCGCAATGTG GCGGCCGTCT ACTATCAGGT GGATATTCCG
ATCATCCACA ACCTGACGTT CACGCAGGCG GGCCGTTACG ACCACTACAG CGACTTTGGT
GGTGCGTTCT CGCCGAGCTT CGCGTTGCGC TTCCAGCCGG TGCGGGCTAT CACGGCTTTC
GCATCGTATA GCCGCGGCTT CCGCGCGCCG ACGCTGGTCG AAAACTCGCA GGCAACCTAT
CTGGCTCACC AGAACCTGGT GGACCCGAAC GACCCGAGCG GCACGCCGAC CAAGCACTTC
ACGACGGAAC AGGTCAACGG CAATCCGGCG CTGCAGCCTG AGCGCACCAA GAACTACAAC
ATCGGCTTCC AGCTTTCGCC GGACTCGTCG ACGGATATTG GTGCGGCGTT CTACAAGATC
CACATTGACG GCGTAATCGG CACGCAGGAT CCGAACGCGG TGATGGATGC GAATAACCCG
TCGAACGTGA TCCGCAATCC TGACGGCACG GTGGCTTACA TCAAGGAACA GTTCGTCAAC
CTCGGCTCGC TCGACACCGA CGGCTTCGAC ATGAACTTCC GCAAGTCGGT GGGTACGAAG
TACGGTACGT TCACGCTGGC AGGCGATTGG GCCTACGTGT GGCACTTCAA GCTGAATAGC
CCGGGTGCGC CGACGCAAGA CTTCGCCGGC AACAACCTCG CGCTGTTGCA GCCGTTCGGT
GCGTCCAATC CGCGCTGGAA GGGTAATACC AGCCTTTCCT GGGACTACCG CAAGCTGACC
ACCACGCTGA CGTGGCAGTA CACCGGCCCG TACACCAACG CGGTGGCGTC CGAGTTCGGC
GACGGCGGTA CGCTGTCGGT GGCGTCGTAC AGCCAGTTCA ACCTGATGGC CACGTATCGC
GGCTTCAAGA ACTGGACGAT CTACGGCGGC ATCAACAACA TCTTCGATCG CAAGCCGCCG
TTCGACGTCG AGTGGCAGGC CACGCCGGAT ATCACGGGCT ACGACCAGTC GCTTTATACC
AACATCGGCC GCTTCTTCCA GGTCGGCGCG TCGTATCGCT TCTGA
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| Protein sequence | MKQRALALAI RRIVWAELAL SAVIAVPAFA QSQPATTGTA AGATTTESTP ATGAAATPSA
DGNTATPTGK GVQQLKKFEV TGSLIRTSDK VGNTEVQTIT TKDIQQSGYT TVADFLRGTS
ANSGSSWGQT TMNSSAQGGG GIALRGLSEK YTLVLVDGQR VANYGKAVNF TDTFFDVNSI
PLNMIDHIDI VKTGAVSVYG SDAIAGVVNI ITKKDFQGLQ IDGQLGKAQH PGDAQGNFSV
LGGIGDLNGD RFNVTAAASY YRDTGSSLGD RDMTAGQDFS QFPGGLAGPL GPNQQSYWTT
ADGTNTALSP CPPGSVSANG ASTCKSNPAS ATSLVPAITR LNAKVRGTFK INDDVQAYAD
FWVSRDETVQ NEGPAVLSSQ TNAFNPATGS ALPLSRTVSG TNPYNPFGVP TQINYTFPNT
VSADTVSTFW RALTGVKGSF TTAKFGDWDW SADYGHSQST VDTTYGNALN VAGLENILQN
GVFNFSNPSA TPNGLNGVFQ NDYEQAISKL DSVTAKTSTS NLFTLPGGPV GVGFGTEFRH
ESNIINSRTY SALGITAPAN VQTVDGERNV AAVYYQVDIP IIHNLTFTQA GRYDHYSDFG
GAFSPSFALR FQPVRAITAF ASYSRGFRAP TLVENSQATY LAHQNLVDPN DPSGTPTKHF
TTEQVNGNPA LQPERTKNYN IGFQLSPDSS TDIGAAFYKI HIDGVIGTQD PNAVMDANNP
SNVIRNPDGT VAYIKEQFVN LGSLDTDGFD MNFRKSVGTK YGTFTLAGDW AYVWHFKLNS
PGAPTQDFAG NNLALLQPFG ASNPRWKGNT SLSWDYRKLT TTLTWQYTGP YTNAVASEFG
DGGTLSVASY SQFNLMATYR GFKNWTIYGG INNIFDRKPP FDVEWQATPD ITGYDQSLYT
NIGRFFQVGA SYRF
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