Gene Bphyt_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1443 
Symbol 
ID6282515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1617722 
End bp1618150 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content61% 
IMG OID642621009 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_001895082 
Protein GI187923440 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATGA ACGTATCGTC GGGCGGCGGC AGCGAACCGG ATGTGATGGT CGACATCAAC 
ACCACGCCGC TGATCGACGT GATGCTGGTG TTGCTGATCA TGCTGATCAT CACGATCCCG
ATTCAGACGC ACGCCATCAA GATGAACCTG CCGGTCGGCA ATCCGCCGCC GCCGATCACG
CAGCCTGAAG TGGTGCAGAT CGATATCGAC TTCGACGGCA CCACGACCTG GAACGGCCAG
CCGGTGCCGA ACCGCGCGGC GCTCGAATCC AGGCTCGCGC AAGTGGCCGC CGAACCGGTT
CAAGCCGAAA TCCATTTGCG GCCGAACAAG CTGGTGCCGT ACAAGGATGT CGCGGAGGTC
ATGGCGTCCG CGCAACGACT GGGCGCGACC AAGATCGGCC TGATCGGCAA TGAGCAGTAC
ATGCAATAG
 
Protein sequence
MGMNVSSGGG SEPDVMVDIN TTPLIDVMLV LLIMLIITIP IQTHAIKMNL PVGNPPPPIT 
QPEVVQIDID FDGTTTWNGQ PVPNRAALES RLAQVAAEPV QAEIHLRPNK LVPYKDVAEV
MASAQRLGAT KIGLIGNEQY MQ