Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1443 |
Symbol | |
ID | 6282515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1617722 |
End bp | 1618150 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642621009 |
Product | Biopolymer transport protein ExbD/TolR |
Protein accession | YP_001895082 |
Protein GI | 187923440 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATGA ACGTATCGTC GGGCGGCGGC AGCGAACCGG ATGTGATGGT CGACATCAAC ACCACGCCGC TGATCGACGT GATGCTGGTG TTGCTGATCA TGCTGATCAT CACGATCCCG ATTCAGACGC ACGCCATCAA GATGAACCTG CCGGTCGGCA ATCCGCCGCC GCCGATCACG CAGCCTGAAG TGGTGCAGAT CGATATCGAC TTCGACGGCA CCACGACCTG GAACGGCCAG CCGGTGCCGA ACCGCGCGGC GCTCGAATCC AGGCTCGCGC AAGTGGCCGC CGAACCGGTT CAAGCCGAAA TCCATTTGCG GCCGAACAAG CTGGTGCCGT ACAAGGATGT CGCGGAGGTC ATGGCGTCCG CGCAACGACT GGGCGCGACC AAGATCGGCC TGATCGGCAA TGAGCAGTAC ATGCAATAG
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Protein sequence | MGMNVSSGGG SEPDVMVDIN TTPLIDVMLV LLIMLIITIP IQTHAIKMNL PVGNPPPPIT QPEVVQIDID FDGTTTWNGQ PVPNRAALES RLAQVAAEPV QAEIHLRPNK LVPYKDVAEV MASAQRLGAT KIGLIGNEQY MQ
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