Gene Bphyt_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1442 
Symbol 
ID6282514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1617275 
End bp1617697 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content61% 
IMG OID642621008 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_001895081 
Protein GI187923439 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGA GCGTTGGGCA GGACGACAAC GACGAGGTCA TCTCCAGTAT CAACACCACG 
CCGCTCGTCG ACGTGATGCT GGTTCTGCTG ATCATCTTTC TGATCACGAT TCCGGTCGTG
ACGCATACGG TGCCGGTGCA ATTGCCGAAG GAGACGATCC AGCCGCTGCA GACCACGCCC
AAAAGTATCG TCATCGCGGT GAACCGCGAC GGCGACTTCT TCTGGAACGA GAAGCAGGTC
GATGCGCCGA CGCTGCTGGC ACGCCTGAAG ACCGTGTCGG TCATGACGCC GCAACCGGAA
GTGCATGTTC GCGGCGACCA GAGCGCGCGT TATGAGTTCA TCGGCCGGGT CATTACCGAG
TGCGAGCGCG CCGGTATCGC CAAGGTTTCG TTTATCACTG AGCCGCCCGC GCGCGGCGGC
TGA
 
Protein sequence
MAMSVGQDDN DEVISSINTT PLVDVMLVLL IIFLITIPVV THTVPVQLPK ETIQPLQTTP 
KSIVIAVNRD GDFFWNEKQV DAPTLLARLK TVSVMTPQPE VHVRGDQSAR YEFIGRVITE
CERAGIAKVS FITEPPARGG