Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1442 |
Symbol | |
ID | 6282514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1617275 |
End bp | 1617697 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642621008 |
Product | Biopolymer transport protein ExbD/TolR |
Protein accession | YP_001895081 |
Protein GI | 187923439 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATGA GCGTTGGGCA GGACGACAAC GACGAGGTCA TCTCCAGTAT CAACACCACG CCGCTCGTCG ACGTGATGCT GGTTCTGCTG ATCATCTTTC TGATCACGAT TCCGGTCGTG ACGCATACGG TGCCGGTGCA ATTGCCGAAG GAGACGATCC AGCCGCTGCA GACCACGCCC AAAAGTATCG TCATCGCGGT GAACCGCGAC GGCGACTTCT TCTGGAACGA GAAGCAGGTC GATGCGCCGA CGCTGCTGGC ACGCCTGAAG ACCGTGTCGG TCATGACGCC GCAACCGGAA GTGCATGTTC GCGGCGACCA GAGCGCGCGT TATGAGTTCA TCGGCCGGGT CATTACCGAG TGCGAGCGCG CCGGTATCGC CAAGGTTTCG TTTATCACTG AGCCGCCCGC GCGCGGCGGC TGA
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Protein sequence | MAMSVGQDDN DEVISSINTT PLVDVMLVLL IIFLITIPVV THTVPVQLPK ETIQPLQTTP KSIVIAVNRD GDFFWNEKQV DAPTLLARLK TVSVMTPQPE VHVRGDQSAR YEFIGRVITE CERAGIAKVS FITEPPARGG
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