Gene Bphyt_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1424 
Symbol 
ID6282610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1592992 
End bp1593969 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content57% 
IMG OID642620990 
Productresponse regulator receiver modulated CheW protein 
Protein accessionYP_001895063 
Protein GI187923421 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTAG ACAACCGCGC GAACGATGAA CGCAGCAACC TGACGAGTTC CAACAAGTTC 
GAGTTGTTGC TGTACCGCCT GGGCTCGGTG CCCGGCAGCG ACGCGCACGA GCTTTATGGC
ATCAACGTCT TCAAGGTGCG GGAAATCTCC ACGATGCCCG CGGTGACGCC GATTGCCGGT
TCGTCGCCGT TCGTGATGGG CGCCGTGGAT ATTCGCGGGC AGATCATTCC TGTGATCGAC
TTGCCGCGGT TGATGGGGTG TGAGCCCACG CGCGGACTGA ATATCTTGCT GGTGACGGAG
TTTGCGCGGT CGACTCAGGC GTTCGCGGTC GAGGAAGTCG ACGATATCGT GCGGCTGGAG
TGGAATCAGG TGTTGTCCGC TGAAGGCGCG GCTGGGGGGA ATCTGGTTAC CAGCATTGCG
CGGATAGATG GGAATACCGG GGATTCGCGG TTGGCGCAAG TGATCGATGT AGAGCAGGTG
TTGCGCGATG TGTTTCCGTC ACAGCATCCT AGTGTGGATC CGACTTCCGT TGGCGATGCG
TTGGGGATTC TGCGCGGGGC GAAGATTCTT GCGGCCGATG ATTCCGGGTT TGCCCGGAAG
CTTATCGAGC AGGCTTTGAG CGCTATTGGC GCGGATTATG TGATGACCAA GACCGGGGAA
GAGGCCTGGA ATACCTTGCA ACAGGTTGCG CGTGAGGCGC AGGCTAACGG GACTCGTGTT
AAGGACAGCA TTGCGCTTGT TTTGACGGAT CTTGAGATGC CTGAGATGGA TGGGTTTATG
CTCACGCGGC AGATTAAGGC TGATGAGCGG ACTCGGGATA TTCCGGTCAT TATTCATTCT
TCTCTGACCG GGGCGGCTAA TGAAGCGCAT GTGAAGAATG CCGGGGCTAA TGGGTATGTG
GCGAAGTTTG CTGCCGCAGA GTTGGCTGAT GCTATTCGGA ATGCGATTGG GGTTGTGCCT
TCTCAGGTTG CTGCTTGA
 
Protein sequence
MAVDNRANDE RSNLTSSNKF ELLLYRLGSV PGSDAHELYG INVFKVREIS TMPAVTPIAG 
SSPFVMGAVD IRGQIIPVID LPRLMGCEPT RGLNILLVTE FARSTQAFAV EEVDDIVRLE
WNQVLSAEGA AGGNLVTSIA RIDGNTGDSR LAQVIDVEQV LRDVFPSQHP SVDPTSVGDA
LGILRGAKIL AADDSGFARK LIEQALSAIG ADYVMTKTGE EAWNTLQQVA REAQANGTRV
KDSIALVLTD LEMPEMDGFM LTRQIKADER TRDIPVIIHS SLTGAANEAH VKNAGANGYV
AKFAAAELAD AIRNAIGVVP SQVAA