| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1408 |
|---|
| Symbol | |
|---|
| ID | 6282715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1574421 |
|---|
| End bp | 1575152 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642620973 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_001895047 |
|---|
| Protein GI | 187923405 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.108659 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACT ACGGACTGGC GCACGTCTGG GCGCAAGGGG ATTTCGTGAC GCGCGGCATC
GCGCTCGCGC TGTTGATCAT GTCGGTGATG TCGTGGAGCG TGATCGTCAT CAAAGGCTGG
AATGTGATGC GCCTGAACCG CCTCACGAAA AATGCGGAAC AGGCGTTCTG GCATTCGGAC
GATCTCGCCG ACGGCGTGAA GAAGCTCGGC GCCGGCTCGT CGACGCCGCA TGACAATCCG
TTCCTCGCGC TGGCGCTGTC GGGCCAGGAA GCGGCCGATC ACCATCATCA GACGCAGCCG
CATCTGCATG ACCGCATGGA TGTGTCGGAC TGGGTCACGC GCTGCCTGAA AGACACGATG
GACGAAAGCG TCGCGCGCAT GCAGAGCGGT CTCGCGATTC TCGCGTCGAT CGGCAGCACG
GCGCCGTTCG TCGGCCTGTT CGGCACGGTG TGGGGCATCT ATCACGCGCT GCTGGCCATC
GGCGCGAGCG GCCAGTCGTC GATCGATCAG GTCGCCGGTC CGGTCGGCGA AGCGTTGATC
ATGACCGCGT TCGGCCTGTT CGTCGCGATT CCTGCGGTGC TCGGCTACAA CGCACTGACG
CGCGCCAACA AGGCCGTGGT CGCCAAGCTG AGCCGCTTTG CGCATGGCCT GCATGCATTC
TTCGTGACGG GCGCGCGCCT GTCGTCGTCC AGGCGCGGCG ACGGCCTGCG TCTCGCCGCA
CGCGCGAACT GA
|
|---|
| Protein sequence | MQNYGLAHVW AQGDFVTRGI ALALLIMSVM SWSVIVIKGW NVMRLNRLTK NAEQAFWHSD
DLADGVKKLG AGSSTPHDNP FLALALSGQE AADHHHQTQP HLHDRMDVSD WVTRCLKDTM
DESVARMQSG LAILASIGST APFVGLFGTV WGIYHALLAI GASGQSSIDQ VAGPVGEALI
MTAFGLFVAI PAVLGYNALT RANKAVVAKL SRFAHGLHAF FVTGARLSSS RRGDGLRLAA
RAN
|
|---|
| |