Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1405 |
Symbol | |
ID | 6282712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1572641 |
End bp | 1573630 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642620970 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001895044 |
Protein GI | 187923402 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.223999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.124738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATCG ATTCACACAA TCTGAATGAC CTGATGTATT TTTCGCAGGT CGTCGAACAT GGCGGCTTTT CCGCCGCCGA ACGCGTGCTG GGGATTTCCA AGTCGCGCCT GTCGCGCCGG CTGACCGAGC TCGAGGCGTC GCTCGGCGTG CGGCTGCTGC AGCGCTCCAC CCGCAAGCTG GCGCTCACCG AAGCCGGTCA ACTGTTCTAT CAACATTGTC AGGCGATGCT GAGCGAGGCG CAGGCGGCCG TCAATGTCGT CCAGCAACTG CGCTCGTCGC CGCGCGGCAC GGTGCGCGTC AGCGTGCCGG TCACGGTCTC GCAGACCATC CTGTCGCAGA TCCTGCCCGA ATTCATGCAT CGGTATCCGG AAGTGCGCGT GGTGATGCGC GTGACGAACC GCGTGGTCGA TCTGTTCGAG GACTCGATCG ACGTCGCGCT GCGCGTGCGT TCCGATCCGC CCGAGAACGC CAACATCGTC GTGCGGCCGC TGTGGCGCAC GCAGCAGATG CTGGTCGGCG CGCCGAGCCT GCTGCAACAG AATGCGCCGC CGTTGCTGCC GGCCGACCTG AACGGTTTCG AAACGCTCGA CGTGCCGACC GGCGACGGAC GCCACGTCTA CAACCTGATC GCGCCCGACG GCACGCGTCA CGCGCACGAA CACGAGCCGC GCCTCGTGAC CGCCGATCTG ATGACGATCC GTGAAGCGGT GCTCGCCGGC GTCGGTATCG CGGCGCTGCC GGAGATGATG TATGGCGCCG CGCTGCGAGC CGGGCAATTG TCGCCGGTAA TGCCGGGCTG GACCTTTCCG ACGCCGCAGT TGTACGCAGT ATTCGTGTCG CGGCAGGGGA TGGTGCCGGC CGTGCGCGCG TTTGTCGATT ATCTGGTCGA GATGCTCGAT CCCGACGACG GCAAATACAT CATGGGCGAG TGTCCCGCCC GCGAAGAAAA GGTCGCTGTC GCGCAGCCGA TGTACGCGAT CGCGTCATAG
|
Protein sequence | MKIDSHNLND LMYFSQVVEH GGFSAAERVL GISKSRLSRR LTELEASLGV RLLQRSTRKL ALTEAGQLFY QHCQAMLSEA QAAVNVVQQL RSSPRGTVRV SVPVTVSQTI LSQILPEFMH RYPEVRVVMR VTNRVVDLFE DSIDVALRVR SDPPENANIV VRPLWRTQQM LVGAPSLLQQ NAPPLLPADL NGFETLDVPT GDGRHVYNLI APDGTRHAHE HEPRLVTADL MTIREAVLAG VGIAALPEMM YGAALRAGQL SPVMPGWTFP TPQLYAVFVS RQGMVPAVRA FVDYLVEMLD PDDGKYIMGE CPAREEKVAV AQPMYAIAS
|
| |