Gene Bphyt_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1405 
Symbol 
ID6282712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1572641 
End bp1573630 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content65% 
IMG OID642620970 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001895044 
Protein GI187923402 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.223999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.124738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG ATTCACACAA TCTGAATGAC CTGATGTATT TTTCGCAGGT CGTCGAACAT 
GGCGGCTTTT CCGCCGCCGA ACGCGTGCTG GGGATTTCCA AGTCGCGCCT GTCGCGCCGG
CTGACCGAGC TCGAGGCGTC GCTCGGCGTG CGGCTGCTGC AGCGCTCCAC CCGCAAGCTG
GCGCTCACCG AAGCCGGTCA ACTGTTCTAT CAACATTGTC AGGCGATGCT GAGCGAGGCG
CAGGCGGCCG TCAATGTCGT CCAGCAACTG CGCTCGTCGC CGCGCGGCAC GGTGCGCGTC
AGCGTGCCGG TCACGGTCTC GCAGACCATC CTGTCGCAGA TCCTGCCCGA ATTCATGCAT
CGGTATCCGG AAGTGCGCGT GGTGATGCGC GTGACGAACC GCGTGGTCGA TCTGTTCGAG
GACTCGATCG ACGTCGCGCT GCGCGTGCGT TCCGATCCGC CCGAGAACGC CAACATCGTC
GTGCGGCCGC TGTGGCGCAC GCAGCAGATG CTGGTCGGCG CGCCGAGCCT GCTGCAACAG
AATGCGCCGC CGTTGCTGCC GGCCGACCTG AACGGTTTCG AAACGCTCGA CGTGCCGACC
GGCGACGGAC GCCACGTCTA CAACCTGATC GCGCCCGACG GCACGCGTCA CGCGCACGAA
CACGAGCCGC GCCTCGTGAC CGCCGATCTG ATGACGATCC GTGAAGCGGT GCTCGCCGGC
GTCGGTATCG CGGCGCTGCC GGAGATGATG TATGGCGCCG CGCTGCGAGC CGGGCAATTG
TCGCCGGTAA TGCCGGGCTG GACCTTTCCG ACGCCGCAGT TGTACGCAGT ATTCGTGTCG
CGGCAGGGGA TGGTGCCGGC CGTGCGCGCG TTTGTCGATT ATCTGGTCGA GATGCTCGAT
CCCGACGACG GCAAATACAT CATGGGCGAG TGTCCCGCCC GCGAAGAAAA GGTCGCTGTC
GCGCAGCCGA TGTACGCGAT CGCGTCATAG
 
Protein sequence
MKIDSHNLND LMYFSQVVEH GGFSAAERVL GISKSRLSRR LTELEASLGV RLLQRSTRKL 
ALTEAGQLFY QHCQAMLSEA QAAVNVVQQL RSSPRGTVRV SVPVTVSQTI LSQILPEFMH
RYPEVRVVMR VTNRVVDLFE DSIDVALRVR SDPPENANIV VRPLWRTQQM LVGAPSLLQQ
NAPPLLPADL NGFETLDVPT GDGRHVYNLI APDGTRHAHE HEPRLVTADL MTIREAVLAG
VGIAALPEMM YGAALRAGQL SPVMPGWTFP TPQLYAVFVS RQGMVPAVRA FVDYLVEMLD
PDDGKYIMGE CPAREEKVAV AQPMYAIAS