Gene Bphyt_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1397 
Symbol 
ID6284402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1566485 
End bp1567033 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID642620962 
Producthypothetical protein 
Protein accessionYP_001895036 
Protein GI187923394 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3470] Uncharacterized protein probably involved in high-affinity Fe2+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00920519 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0195288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATTT CTTCATTTGT GCGTGGTGGC GCAGCAGCGG TGGCCGCAGT CGCGGCGTTC 
TCGGCAACGG CGGCGGAATA TCCGATCGGC AAGCAGCAGA TTCATGGCGG CATGGAAATC
AATGCGGTCT ATCTGCAGCC GATCACGATG GAACCCGAAG GCATGATGCG CAAAGCCTCG
GATTCGGACA TCCACCTGGA AGCCGACATT CACGCGGTCA AGAACAACCC GACCGGCTTC
GCCGAAGGCG ACTGGATGCC GTATCTGCAA GTGCACTACG AACTGACGAA AGCCGGTTCG
ACTCAGACGC AAAAGGGCGA CCTGATGCCG ATGGTCGCCA ACGACGGCCC GCACTACGGC
GACAACGTCA AGCTGCAAGG CCCGGGCAAG TATCACCTGA AGATGGTTGT CGAGGCGCCG
ATGCAATCGG GCCACATGGC GTTCGGCCGC CACGTCGACA AGGAAACCGG CGTGGGTCCG
TGGTTCAAGC CGATCACCCT CGAATACGAC TTCGCGTACG CCGGCATCGG CAAGAAGGGC
GGTTACTGA
 
Protein sequence
MRISSFVRGG AAAVAAVAAF SATAAEYPIG KQQIHGGMEI NAVYLQPITM EPEGMMRKAS 
DSDIHLEADI HAVKNNPTGF AEGDWMPYLQ VHYELTKAGS TQTQKGDLMP MVANDGPHYG
DNVKLQGPGK YHLKMVVEAP MQSGHMAFGR HVDKETGVGP WFKPITLEYD FAYAGIGKKG
GY