| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1394 |
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| Symbol | |
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| ID | 6284399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1560935 |
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| End bp | 1562173 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620959 |
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| Product | Patatin |
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| Protein accession | YP_001895033 |
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| Protein GI | 187923391 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.127085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00234319 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCAAC GCAATCTCAA GCGGGCGCGC GTCGGCGCGC CCGGCGACGG GGAAGGCGAG
GGCGCCGGTC CGGCGCCCGC CACGCATCCC GGCCGGCACC TCCATTTGCC CAAGTACGAA
ACCGTCGCCT TGATGCTGCA AGGCGGTGGC GCCCTGGGCG CTTATCAGGC CGGTGTCTTT
CAGGGACTTT ACGAGGCCGG CATCGAACCG AACTGGCTGG CCGGCATTTC GATCGGCGCG
TTGAATACGG CAATCATCGC CGGCAATCCG CCTGAAAAGC GCGTTGAACG GCTGCTGCAA
TTCTGGGAGA CGATCTGCCA GCCGGCCTTC GGGCCGCCGC TGCCTGCGTT CATCGAGCAC
GCTCTCTTCA ATTCCAGCGA CGCAATACGC AAGGCCTTCA CGGCAACGCA GGCCGTGGGC
GCCATCGTCG AGGGGCAGAA GGGCTTTTTT GTGCCGCGCT TCCCGCCGCC GTTGCCCACG
GTGTCCGGGC CGCCGCAATT GGCCAGCTAT TACGACACCA CGCCGTTGAA GGCCACGCTC
GAAGCGTTCT GCGATTTCGA CCGGATCAAT TCGAAAGAAA TGCGCGTCTC GGTCGGGGCG
GTCAATTGCG GTACGGGAAA TTTCGCGTAC TTCGATAACA CGCATACAAC GCTCAGGCCC
GAGCATTTCA TGGCGTCAGG CGCGTTGCCG CCCGGTTTCG CGGCGGTCGA GATCGATGGT
CAGTACTACT GGGACGGCGG CTTGATGTCG AACACGCCGC TCTATGAGGT GATCCAGTCC
ACGCCGCGTC GCGACACGCT CGCCTTCCAG GTCGATCTCT GGAGCGCGAT CGGACCGGTG
CCGGACAACA TCACCGACGT GCAAGGGCGC ATGAAAGACA TCCAGTATTC GAGCCGCACC
CGTCTCGTGA CCGATATGCT GCAGCGGTCG CAGCGTTTCC GGCATGTGTT GCGCGAGGTG
CTGGATCGCG TGCCGTCCGA TCAGCGTGAC GACCCGTGGT GCAAGCTGGC CGAGGATCTC
TCGTGTTCGA AGCGCTACAA CGTGGTCCAT CTGATCTACC GCCACAAGGA ATACGAAGGT
CACTACAAGG ACTTTCAATT CGGCCTGTCG ACGATGCGGG AACATTGGCA AAGCGGTTTG
GAGGACATCC GCCATTCGCT CGCGCAACCC GATTGGCTCG ACATGCCGGA TAACGACGCG
GGCTTTGTCA CGCACGATAT CCATCGGGAT GCGCGCTGA
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| Protein sequence | MAQRNLKRAR VGAPGDGEGE GAGPAPATHP GRHLHLPKYE TVALMLQGGG ALGAYQAGVF
QGLYEAGIEP NWLAGISIGA LNTAIIAGNP PEKRVERLLQ FWETICQPAF GPPLPAFIEH
ALFNSSDAIR KAFTATQAVG AIVEGQKGFF VPRFPPPLPT VSGPPQLASY YDTTPLKATL
EAFCDFDRIN SKEMRVSVGA VNCGTGNFAY FDNTHTTLRP EHFMASGALP PGFAAVEIDG
QYYWDGGLMS NTPLYEVIQS TPRRDTLAFQ VDLWSAIGPV PDNITDVQGR MKDIQYSSRT
RLVTDMLQRS QRFRHVLREV LDRVPSDQRD DPWCKLAEDL SCSKRYNVVH LIYRHKEYEG
HYKDFQFGLS TMREHWQSGL EDIRHSLAQP DWLDMPDNDA GFVTHDIHRD AR
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