Gene Bphyt_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1392 
Symbol 
ID6284397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1558933 
End bp1559904 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content61% 
IMG OID642620957 
Productaldo/keto reductase 
Protein accessionYP_001895031 
Protein GI187923389 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID[TIGR01293] voltage-dependent potassium channel beta subunit, animal 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.203744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00446461 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTATC GACGTCTGGG CCGTTCCGGC CTGCAAGTCA GCGAACTGTC CATCGGCTCG 
TGGGTCACCT ACGGCAATCA GGTGGACACC CACGCGGCAC GCGAATCGCT CGCGGCCGCA
CGTGACGCAG GAGTCAACTT TTTCGACAAC GCCGAGGTGT ATGCCGGCGG CAAGTCCGAA
GAAATCATGG GCCAGGCGCT CAAGGAACTG GCGTGGCCGC GCGTGAGCTA CGTGGTGTCG
ACGAAATTCT TCTGGGGACT CGCGGAAGCA CCGAACCAGT ACCACACGCT GAACCGCAAA
TATCTGCTGA ACGCGATCGA TGCGTCGCTC AAACGGCTGC AGCTCGATTA TGTCGATCTG
GTGTTCTGTC ATCGTCCGGA CCCGAACACG CCGGTAGAGG AAACCGTCTG GGCCATGAGC
GACATGATCA CTCGCGGCAA GGCGCTGTAC TGGGGCACGT CCGAATGGAG CGCCGACGAA
ATCCGCGCCG CTTACGACAT CGCGGAGCGT CATCATCTGC ACAAGCCGGT CATGGAGCAG
CCGCAGTACA ACCTGTTCCA TCGCAAGCGC GTCGAGGAGG AATACAAGCG GCTTTACGAG
GATATCGGCC TCGGGCTGAC TACCTGGAGC CCGCTCGCAT CCGGCTTGCT GACCGGCAAA
TACCGTGACG GCGTGCCGGC CGACAGCCGC GCGCAGTTGG ATGGTTACGA CTGGCTACGC
AAGCAGGTCA CCGACGCGGG CAAGAACAAC GTGGTCGGCA AGCTCGGCGA AGTGGCTAAC
GAGTTGGGCT GCACGATCGG TCAACTCGCC ATTGGCTGGA TTCTGAAGAA TCCGAATGTC
AGCACCGTGA TAACGGGTGC GTCGCGGGTC GAACAGATCG GCGAGAACAT GAAGTCCGCC
GACGTGGCCG CACGGATCAC GCCGGAAGTC AAAACGCGAA TCGAGGAAAT CATCGGCGAC
GCGCACGACT GA
 
Protein sequence
MNYRRLGRSG LQVSELSIGS WVTYGNQVDT HAARESLAAA RDAGVNFFDN AEVYAGGKSE 
EIMGQALKEL AWPRVSYVVS TKFFWGLAEA PNQYHTLNRK YLLNAIDASL KRLQLDYVDL
VFCHRPDPNT PVEETVWAMS DMITRGKALY WGTSEWSADE IRAAYDIAER HHLHKPVMEQ
PQYNLFHRKR VEEEYKRLYE DIGLGLTTWS PLASGLLTGK YRDGVPADSR AQLDGYDWLR
KQVTDAGKNN VVGKLGEVAN ELGCTIGQLA IGWILKNPNV STVITGASRV EQIGENMKSA
DVAARITPEV KTRIEEIIGD AHD