Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1385 |
Symbol | |
ID | 6281227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1553464 |
End bp | 1554384 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642620950 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_001895024 |
Protein GI | 187923382 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.60749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00125626 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCAAAG TTGCCGTCAT TGGTGCCTCC GGGCTGCTTG GCCGCGCGCT CGTCGACGAA CTGGCGCAGC AGAGCGATTG GCAAGTCGTC GCCACAGCAT TCAGCCGGCC GGCGCCGGGC AAGGTCTCGC TGGATATCCG CGACGCGCGG GCGGTCGAGC AGTTCGTCGA ACGCGAAGCA CCGGACGCGC TCGTGATTGC CGCGGCGGAG CGTCGGCCGG ACGTGTGCGA GCATGATCCC GCGCTGGCGC GCGCGCTGAA TGTCGATGCG GTGCGCACCC TTGCCAGCGC GGCAAACCGG CGCGGCGCAT GGACGCTGTC GATCTCTACC GACTATGTGT TCGACGGCAC GCACCCGCCC TACCAGCACG ATTCCGTGCC CGCGCCGCTC AACGCCTATG GGCATAGCAA GCTTGAAGGC GAGCACGCGC TGACTGAATC GACTGACCTC GGCTGCGTGT TGCGTCTGCC GCTGCTGTAC GGGCCGATCG TCAGTTGGGC GGAGTCGGCC GTGACGAGTC TCGTGCCCGC GATCGCCGGG TCGGCGGCGC CGGGGAGCAA GCCCGCCGTC ATGGATGCAT GGGCGATCCG TTACCCCACT TTCACGCCGG ACGTCGCGTT CGTAATCCGC CAGATGCTCG AACGGCATGC GCAAGGCGAC GCGATCCGCG GCATCGTGCA ATGGTCCGGC GACGAACCGA TGAACAAGTA CGAGATCGCC GTGCGCCTTG CCGAAGCGCT GCAACTCGAC GCGCATCTGA CGCCGCAAGC TACGCCGACC GATTCGACGC CCCGGCCGCA TAACTGCCAC CTGGCTTCGA GCCGCCTCGA GGCGCTCGGC ATAGGCCGGC GCACGCCGTT CGATACGGCG ATTCGGCAAG TGTTAGCGGC ATTTCCGTGG CGCGGCGCCG CACACGCATA G
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Protein sequence | MFKVAVIGAS GLLGRALVDE LAQQSDWQVV ATAFSRPAPG KVSLDIRDAR AVEQFVEREA PDALVIAAAE RRPDVCEHDP ALARALNVDA VRTLASAANR RGAWTLSIST DYVFDGTHPP YQHDSVPAPL NAYGHSKLEG EHALTESTDL GCVLRLPLLY GPIVSWAESA VTSLVPAIAG SAAPGSKPAV MDAWAIRYPT FTPDVAFVIR QMLERHAQGD AIRGIVQWSG DEPMNKYEIA VRLAEALQLD AHLTPQATPT DSTPRPHNCH LASSRLEALG IGRRTPFDTA IRQVLAAFPW RGAAHA
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