| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1384 |
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| Symbol | |
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| ID | 6281226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1549762 |
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| End bp | 1553343 |
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| Gene Length | 3582 bp |
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| Protein Length | 1193 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642620949 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001895023 |
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| Protein GI | 187923381 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.38254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00082485 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCACCAA CCCAGCCGTC ACTCCTCGTG CAGCAGCCAC TCGCCACTCA GTTGCCGGCG
TATGCGGAAT TGCATTGCCT GACTAATTTC TCGTTTCTGC GGGGCGCATC GCATCCTCAT
GAGCTCGTCG AGCAGGCGAT GTCGCGCGGC TACAGCGCGC TCGCCATCAC CGACGAATGC
TCGTTGGCCG GCGTCGTGCG CGCTCACACG GCGTTGAAGG AAATCAAAAC GGAGCGGGAG
CGTCAGCAGA AAGAGCGCGA GGACAAGGCA AACACTGCGC AATCGGAAGC GCCTTCGGAA
GACGGGACAC AAATCGAAGC GTCGCAACAG GAAACCGCGC CACAGGAAAC TGCAGAAGCC
GAGGCACCAA AACCCCTCCC TCACCTGATC ATCGGCAGCG AACTCAATCT CACCGACGAA
ACCGGCGATC CCTTCTGCAC CCTCGTTGCG CTAGCAACCA ACCGCAACGG TTACGGCAAC
CTTTCCGAAC TGATTACGCT AGCCCGCTCG CGCGCGGACA AAGGCAGCTA TCGCCTCGGT
CCATCCGACT TCACTGCCTC CTTACCCCAT CTGGCGCATC TAAAAACCTT ACCCGATTGC
GTACTGATGC TCGTGCCGCA GCGCACGGCG ACGCTTTCGC ATACGCTGCG CTGCGCGCAT
TGGCTCGCCT CGTTCGCTGC ACAACGGGCA TGGATCGCGC TCGAACTTTG GCAAACGGGC
AGCGACGATC TTCAGATCGA CGCCTTGCGC ATGATTTCAA AAGCGAGCGG TTTGCCGCTG
GTCGCGGCAG GCGGCGTTCT CATGCATGCC CGATCGCGCA AGCCGTTGCA GGACACGATG
ACCGCCATCG GCCTCGTCAC GCCGCTATCG CAATGCGGCC ATGCGCTCGA GGCGAACGCG
GAGCGGCACA TGCGTACGCG CGTGCGGCTT GGCAAACTGT ATCCGCGCGA TACGCTGGAA
GAAACGCTGC GTATCGCCGC GCTATGCCGC TTTTCGCTCG ACGAACTCAA GTATGAGTAT
CCCGAGGAAC TCGTGCCCGC CGGCGAGTCG CCATCGAGCT ATCTGCGCAA GCTGGTTATG
GCCGGCGCGA TGGAGCGCTG GCCCAAGGGC ATCGACCTGA AGCGAATCGG TCAGATCGAA
AAGGAGTTAG GGCTGATCGC CGATCTGAAA TACGAAAAGT ATTTTCTGAC GGTGCACGAT
ATCGTGAGTT TCGCGCGCTC CAGAAACATT CTGTGTCAGG GGCGAGGGTC AGCGGCGAAT
TCGATCGTTT GTTATTGCCT GCACGTGACG GAAATCGATC CGGTGCACAT GAACATGCTG
ATCGAGCGTT TCATCTCGCG CGCGCGCAAC GAGCCGCCTG ATATCGACGT CGACTTCGAG
CATCAGCGGC GCGAAGAGGT CATTCAATAT ATCTATACGA AGTACGGCCG TCATCGGGCG
GCGCTGACTG CGTCGCTGAT TACATATCAC GCGCGTAGCG CACTGAAGGA CGTCGGCAAG
GCGCTGGGTC TCGAGGTGTC GTTGATCGAG CGGATCAGCA AGTCACAACA ATGGTGGGAC
GGCACGGATG CGGTCGCCAA ATATCTGGCT GAAGCGGGCT TCGACGCCAA TTCGCACATC
ACGCAGAATC TGATTCGTCT CACGAAGGAG TTGCGCGCTT TCCCGCGTCA TCTGTCGCAA
CACGTCGGTG GCTTTGTGAT CGCGAAAGAC AAACTGTCGC GACTCGTGCC GATCGAGAAC
GCGACGATGA AAGACCGCAG CGTGATCGAG TGGGACAAGG ACGATATCGA CGCGCTCAAG
TTGCTGAAAG TCGACGTGCT GGCGCTCGGC ATGTTGTCGG CGATCCGGCG CGCGCTGGAA
TTCGTCGCGT TGAGGCGTGG CTTTCCGAAG TTCAGTGTGC AGGATATTCC GCGTGAGGAT
CGCGCCGTCT ACGAAATGTG CGGCCATGCC GATACGATCG GCGTATTTCA GATCGAATCG
CGTGCGCAGC AAAGCATGTT GCCGCGTCTG AAGCCCAACA AGTACTACGA TCTCGTGATC
GAAGTGGCGA TCGTGCGGCC CGGGCCGATT CAGGGCGGCA TGGTGCATCC CTATCTGCGC
CGCAAGCAGG GGCTCGAGGC GGTCGACTAC GCGAAGGATG AATTGCGTCC CGTGCTCGAA
CGTACGCTCG GCGTGCCGAT TTTCCAGGAA CAGGTCATGC ATCTGGCGAT GGTTGCGGCG
AAATATACCG GTGAGCAGGC CGATCAGTTG CGGCGCGCAA TGGCCGCATG GCGGCGCAGC
GGCAACCTCG CGAAGTATCA GAAGGATTTG AACGAGCGCA TGCTCAAGCG TGGTTATGAA
CAGGAGTTCA TCGACCGCAT CTGCAAACAG ATCGAAGGCT TCGGCGAATA TGGTTTTCCG
GAGAGCCATG CGGCGAGCTT CGCGCTGCTC GTCTATCTCA GCGCATGGTT GAAGCGCTAT
GAACCGGCTG CTTTTCTGGC GGGTTTGCTG AACAGTCAGC CGTTGGGGTT TTATTCGCCG
TCGCAACTCG TTCAGGATGC AAAGCGTCAC GGCGTCGAGG TATTGCCGCC CGACGTGACC
TTGAGCGATT GGGAGTCGAC ATTCGAGAGA CGTGGTCATG AAGGACAACG GATCTCAGCG
GACGAAACCT GTTTGCATCG TCAGCAGGCC GTACTATCCG CGCAGCAATT GCGCGATCTT
TCGCTGCGGC GTCTGACGGT GAGCAGGACG GTCCGGCGCG CGGCGCAGCG ATTGACTGCC
CGCGTGTTTC AACCGTCGCA CACTTATGGC GCGCGCGGTC CCGCTGTGCG CATCGGCATG
CATCTGATCA AGGGCTTCTC GCAAGCGGCG GCCGAACGCA TCATGGCCGC CCGGAACGAG
GCGCCGTTTA CCGATGTCGA CGATCTGGCG CGACGCGCGG CCCTGACGCG GCGCGATCTC
GAAGCGCTTG CCGCGGCGAA CGCGCTGGTC AGTATCGCGG GACATCGACG CGAAGCGTGG
TGGGCCGTGA CGGCGCAGCA CACGGTGCCC AAACTGCTGC GCGATGCGCC GATCGCCGAA
GCGCCGCTAA TGTTGCCGCA GGCAGCCGAA AGCCGCGAAA TCGTCGACGA CTACGCGAGC
CTTGGCCTTA CGCTCAATCG TCATCCGCTT GCGCTTTTGC GTGCACGCCT TGCCCAGCAT
CGTTTTCGCA CGGCCGCCGA ACTCGCCGCG TGTCAGCACG GCACGCTGGC GCGAGCGTGC
GGCATCGTCA CCGTGCGGCA GCGGCCGGGC ACGGCAAACG GCACGGTGTT CGTTTCCATC
GAAGACGAGA CCGGTTCGAT CAATGTGATC GTCTGGCCGT CACTGGTGGA AAAGCAGCGC
AAGGTTTTGT TGGGCGCATC GTTGCTGGCG GTCTACGGCG TTTTGCAGCG CGACGACGGC
GTGGCGACCG GCGGCGACCA GGCCGGCAAC GGAGTGAGCG CGAATCAGGC TAAGGGGAAG
CGGAAGAACA AGGGTGAAGT GATCCATCTC GTCGCTCATC GTCTCGAAGA CCATAGCGAA
TGGCTGGGTG AACTGGCCAC GGCGAGCCGC GATTTTCATT GA
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| Protein sequence | MPPTQPSLLV QQPLATQLPA YAELHCLTNF SFLRGASHPH ELVEQAMSRG YSALAITDEC
SLAGVVRAHT ALKEIKTERE RQQKEREDKA NTAQSEAPSE DGTQIEASQQ ETAPQETAEA
EAPKPLPHLI IGSELNLTDE TGDPFCTLVA LATNRNGYGN LSELITLARS RADKGSYRLG
PSDFTASLPH LAHLKTLPDC VLMLVPQRTA TLSHTLRCAH WLASFAAQRA WIALELWQTG
SDDLQIDALR MISKASGLPL VAAGGVLMHA RSRKPLQDTM TAIGLVTPLS QCGHALEANA
ERHMRTRVRL GKLYPRDTLE ETLRIAALCR FSLDELKYEY PEELVPAGES PSSYLRKLVM
AGAMERWPKG IDLKRIGQIE KELGLIADLK YEKYFLTVHD IVSFARSRNI LCQGRGSAAN
SIVCYCLHVT EIDPVHMNML IERFISRARN EPPDIDVDFE HQRREEVIQY IYTKYGRHRA
ALTASLITYH ARSALKDVGK ALGLEVSLIE RISKSQQWWD GTDAVAKYLA EAGFDANSHI
TQNLIRLTKE LRAFPRHLSQ HVGGFVIAKD KLSRLVPIEN ATMKDRSVIE WDKDDIDALK
LLKVDVLALG MLSAIRRALE FVALRRGFPK FSVQDIPRED RAVYEMCGHA DTIGVFQIES
RAQQSMLPRL KPNKYYDLVI EVAIVRPGPI QGGMVHPYLR RKQGLEAVDY AKDELRPVLE
RTLGVPIFQE QVMHLAMVAA KYTGEQADQL RRAMAAWRRS GNLAKYQKDL NERMLKRGYE
QEFIDRICKQ IEGFGEYGFP ESHAASFALL VYLSAWLKRY EPAAFLAGLL NSQPLGFYSP
SQLVQDAKRH GVEVLPPDVT LSDWESTFER RGHEGQRISA DETCLHRQQA VLSAQQLRDL
SLRRLTVSRT VRRAAQRLTA RVFQPSHTYG ARGPAVRIGM HLIKGFSQAA AERIMAARNE
APFTDVDDLA RRAALTRRDL EALAAANALV SIAGHRREAW WAVTAQHTVP KLLRDAPIAE
APLMLPQAAE SREIVDDYAS LGLTLNRHPL ALLRARLAQH RFRTAAELAA CQHGTLARAC
GIVTVRQRPG TANGTVFVSI EDETGSINVI VWPSLVEKQR KVLLGASLLA VYGVLQRDDG
VATGGDQAGN GVSANQAKGK RKNKGEVIHL VAHRLEDHSE WLGELATASR DFH
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