Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1382 |
Symbol | |
ID | 6281585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1547236 |
End bp | 1548075 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642620947 |
Product | hypothetical protein |
Protein accession | YP_001895021 |
Protein GI | 187923379 |
COG category | [S] Function unknown |
COG ID | [COG4544] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.884364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00791695 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGCAG CGATTCAGCT TGCGACATCC GCCCTGTCGT CCCAATTGCG GCGTCAGGTG TGGCAGGGCA ATGAGCTTGC CGAGGCAGAC TCGCGTGTGA TTTCCAGCGG CTATGCCGCG CTGGATTGTT TGTTGCCGGG GCAAGGCTGG TCAGCTGGCG GTCTGACGGA ATTGTTGATC GAGCATGGTG GCGTTGGTGA AATACGTCTA CTGGCCCATG CGCTGTGTCA TCTGACGAAG CACGTCAAGC GGCATGTCAT GCTCGTGGCG CCTCCGTATC AGCCATGCGC TGCCGCATTG AAAGCCTGGG GTGTCGATGT CGAGCGAGTC TTATGGGTGC GCTCGAGTGA GGATCAGGCC TTGTGGGCCG CTGCTCAGGC CTTGAAGCAG GATGGCATCG GCGCGGTCCT GGTTTGGCTG CCGAATGCGC GCGCCGACAA GGTCAGGCGT CTGCAGGTAG CGGCCCAGGA GTCGGCATCG CTGGCATTTT TGATCCGGCC TGTCGAAGCC GCCACGCAAT CTTCCCCGGC GCCATTGCGA ATGATCTGCG AGCCGCTCTT ACCGGCCAAT GCGCAGACGA TCAACCGTCG TCAATGGTTG CAGGAGATTG GTGTGTCGAT CGACATCTTC AAGCGTCGCG GGCCGCCGCT AGCCGAGCCT CTTCGTCTCG TTTTGCCTTT ACAAAGCGTC TTGTTGCCGG AAAACGGAGT GGGTGGCCAT CAAGGGCCAG AGATTAAACA TGCTGTGGAT CGCAGTCACA TTGCCACTCT TGTCGCTGGA AGCGGTGAAG CCTCTCACGC CGCTCCCGGA TGGTTCGCTC GCGAAGCCGA ATCGGCGTGA
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Protein sequence | MAAAIQLATS ALSSQLRRQV WQGNELAEAD SRVISSGYAA LDCLLPGQGW SAGGLTELLI EHGGVGEIRL LAHALCHLTK HVKRHVMLVA PPYQPCAAAL KAWGVDVERV LWVRSSEDQA LWAAAQALKQ DGIGAVLVWL PNARADKVRR LQVAAQESAS LAFLIRPVEA ATQSSPAPLR MICEPLLPAN AQTINRRQWL QEIGVSIDIF KRRGPPLAEP LRLVLPLQSV LLPENGVGGH QGPEIKHAVD RSHIATLVAG SGEASHAAPG WFAREAESA
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