Gene Bphyt_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1382 
Symbol 
ID6281585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1547236 
End bp1548075 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content60% 
IMG OID642620947 
Producthypothetical protein 
Protein accessionYP_001895021 
Protein GI187923379 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.884364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00791695 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGCAG CGATTCAGCT TGCGACATCC GCCCTGTCGT CCCAATTGCG GCGTCAGGTG 
TGGCAGGGCA ATGAGCTTGC CGAGGCAGAC TCGCGTGTGA TTTCCAGCGG CTATGCCGCG
CTGGATTGTT TGTTGCCGGG GCAAGGCTGG TCAGCTGGCG GTCTGACGGA ATTGTTGATC
GAGCATGGTG GCGTTGGTGA AATACGTCTA CTGGCCCATG CGCTGTGTCA TCTGACGAAG
CACGTCAAGC GGCATGTCAT GCTCGTGGCG CCTCCGTATC AGCCATGCGC TGCCGCATTG
AAAGCCTGGG GTGTCGATGT CGAGCGAGTC TTATGGGTGC GCTCGAGTGA GGATCAGGCC
TTGTGGGCCG CTGCTCAGGC CTTGAAGCAG GATGGCATCG GCGCGGTCCT GGTTTGGCTG
CCGAATGCGC GCGCCGACAA GGTCAGGCGT CTGCAGGTAG CGGCCCAGGA GTCGGCATCG
CTGGCATTTT TGATCCGGCC TGTCGAAGCC GCCACGCAAT CTTCCCCGGC GCCATTGCGA
ATGATCTGCG AGCCGCTCTT ACCGGCCAAT GCGCAGACGA TCAACCGTCG TCAATGGTTG
CAGGAGATTG GTGTGTCGAT CGACATCTTC AAGCGTCGCG GGCCGCCGCT AGCCGAGCCT
CTTCGTCTCG TTTTGCCTTT ACAAAGCGTC TTGTTGCCGG AAAACGGAGT GGGTGGCCAT
CAAGGGCCAG AGATTAAACA TGCTGTGGAT CGCAGTCACA TTGCCACTCT TGTCGCTGGA
AGCGGTGAAG CCTCTCACGC CGCTCCCGGA TGGTTCGCTC GCGAAGCCGA ATCGGCGTGA
 
Protein sequence
MAAAIQLATS ALSSQLRRQV WQGNELAEAD SRVISSGYAA LDCLLPGQGW SAGGLTELLI 
EHGGVGEIRL LAHALCHLTK HVKRHVMLVA PPYQPCAAAL KAWGVDVERV LWVRSSEDQA
LWAAAQALKQ DGIGAVLVWL PNARADKVRR LQVAAQESAS LAFLIRPVEA ATQSSPAPLR
MICEPLLPAN AQTINRRQWL QEIGVSIDIF KRRGPPLAEP LRLVLPLQSV LLPENGVGGH
QGPEIKHAVD RSHIATLVAG SGEASHAAPG WFAREAESA