Gene Bphyt_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1380 
Symbol 
ID6283742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1538473 
End bp1539687 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content66% 
IMG OID642620940 
Producthypothetical protein 
Protein accessionYP_001895019 
Protein GI187923377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0101715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000593666 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCTCGC GAATCGCCAA ACGTCTCCCC CCCGATGCCG ACAAGCTTGT CGGTCTCTCG 
CTCGCGCTTT TCGCGTCGGG CAGCCGCACC GAGGACCGCT TCTGGGAAGC AAAACTCGAC
GCGCTGCTGG CCAAAATCGT CCGCAACGCC AACCAGACTA CGCTGGACGC CGCGCTCGAT
CATCTGCAGC AAAATCATCC CGATGCCTAC GGCGCGCTCG CCGATATGGC GGAAACCCAT
AGTGAATCGT TCATCGTCGA ACACGAAGGC GTGCCTTACG AGGCGCTGCT GATCGCCGCG
CCCGTGCTCG CGTGGACGCG CTACATGATC CCGTCCGGCC CGCTCAAGGC CGACGCCGCC
GACGCCCTGC GCGCGCATCT GCAAGCGCAT GTGCTCGCGG CCAACACGCG GGTCGCCATG
GCGCCGTTCC TGTACAGCAT CGATCAACTG CCGCGCCACC ATGTCGAAAC CTGGCGCATC
GCCCAGCAAC TCGCGCAGGC GGCCACGGCT GGTGGCAACG CCAAACTGAA TTTCGGCGAG
TTGCCCGAAA CTTCGCCGAT TCTCGCCGAC CCGCGCTTCC TGCTGGCCGT GGTCGCGGCG
CCGGTCGGCG AACCCACGTT CCGCTGGCAG GAAGAAGAAC ACGGCAACCG GATCGAACGC
GGGCAATGCC TTGAACAATG GGCTACGCAA GGTGGCGCCA ATCTGTCGCT GGTGTTGCCG
GGCTGCGAAT TCGAGTGCCT GCTGCCAGAC GCCTATTACT CGGCCTGCCG CGACGCCGAC
GAACGCGTGC GCCCTCACAC GGTGCGCACT GCCGTGCGCT ATCTGTTCGA CACGATCGGC
GCGGCGCCGC AGGAGCTGCG CGCTGTTGTC GCAGGCTTCG GCGAACGCCG CATCGACGAA
TACCGCGTCG GCTTCACGCG CCGCGGCAGC AATGATGTGA TCTACGGCGT CGTGTGGCCA
CTGTACGGCC GTGAGAACGG CGAGCCAGGC ATCGACGAAG AGCCGCAGGA AACCGCCGCA
TCGGACGACC CACTCGAAGA AATCGTCGCG CTGCTCAAGG AAACCGGCGT GACCGAAGTG
CGCCGCCATG CGGGCCGCTT CGAGCCAGAG TACTGTGACG ACTGCGGCGT ACCGCTGTAT
GCCGATCCGC TCGGCGAAAT CGTCCACGCC GAAATGCCGG AGGACGCGGA GCCCGCGCAG
CCGCACTTCC ATTGA
 
Protein sequence
MRSRIAKRLP PDADKLVGLS LALFASGSRT EDRFWEAKLD ALLAKIVRNA NQTTLDAALD 
HLQQNHPDAY GALADMAETH SESFIVEHEG VPYEALLIAA PVLAWTRYMI PSGPLKADAA
DALRAHLQAH VLAANTRVAM APFLYSIDQL PRHHVETWRI AQQLAQAATA GGNAKLNFGE
LPETSPILAD PRFLLAVVAA PVGEPTFRWQ EEEHGNRIER GQCLEQWATQ GGANLSLVLP
GCEFECLLPD AYYSACRDAD ERVRPHTVRT AVRYLFDTIG AAPQELRAVV AGFGERRIDE
YRVGFTRRGS NDVIYGVVWP LYGRENGEPG IDEEPQETAA SDDPLEEIVA LLKETGVTEV
RRHAGRFEPE YCDDCGVPLY ADPLGEIVHA EMPEDAEPAQ PHFH