Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1380 |
Symbol | |
ID | 6283742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1538473 |
End bp | 1539687 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642620940 |
Product | hypothetical protein |
Protein accession | YP_001895019 |
Protein GI | 187923377 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0101715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000593666 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCTCGC GAATCGCCAA ACGTCTCCCC CCCGATGCCG ACAAGCTTGT CGGTCTCTCG CTCGCGCTTT TCGCGTCGGG CAGCCGCACC GAGGACCGCT TCTGGGAAGC AAAACTCGAC GCGCTGCTGG CCAAAATCGT CCGCAACGCC AACCAGACTA CGCTGGACGC CGCGCTCGAT CATCTGCAGC AAAATCATCC CGATGCCTAC GGCGCGCTCG CCGATATGGC GGAAACCCAT AGTGAATCGT TCATCGTCGA ACACGAAGGC GTGCCTTACG AGGCGCTGCT GATCGCCGCG CCCGTGCTCG CGTGGACGCG CTACATGATC CCGTCCGGCC CGCTCAAGGC CGACGCCGCC GACGCCCTGC GCGCGCATCT GCAAGCGCAT GTGCTCGCGG CCAACACGCG GGTCGCCATG GCGCCGTTCC TGTACAGCAT CGATCAACTG CCGCGCCACC ATGTCGAAAC CTGGCGCATC GCCCAGCAAC TCGCGCAGGC GGCCACGGCT GGTGGCAACG CCAAACTGAA TTTCGGCGAG TTGCCCGAAA CTTCGCCGAT TCTCGCCGAC CCGCGCTTCC TGCTGGCCGT GGTCGCGGCG CCGGTCGGCG AACCCACGTT CCGCTGGCAG GAAGAAGAAC ACGGCAACCG GATCGAACGC GGGCAATGCC TTGAACAATG GGCTACGCAA GGTGGCGCCA ATCTGTCGCT GGTGTTGCCG GGCTGCGAAT TCGAGTGCCT GCTGCCAGAC GCCTATTACT CGGCCTGCCG CGACGCCGAC GAACGCGTGC GCCCTCACAC GGTGCGCACT GCCGTGCGCT ATCTGTTCGA CACGATCGGC GCGGCGCCGC AGGAGCTGCG CGCTGTTGTC GCAGGCTTCG GCGAACGCCG CATCGACGAA TACCGCGTCG GCTTCACGCG CCGCGGCAGC AATGATGTGA TCTACGGCGT CGTGTGGCCA CTGTACGGCC GTGAGAACGG CGAGCCAGGC ATCGACGAAG AGCCGCAGGA AACCGCCGCA TCGGACGACC CACTCGAAGA AATCGTCGCG CTGCTCAAGG AAACCGGCGT GACCGAAGTG CGCCGCCATG CGGGCCGCTT CGAGCCAGAG TACTGTGACG ACTGCGGCGT ACCGCTGTAT GCCGATCCGC TCGGCGAAAT CGTCCACGCC GAAATGCCGG AGGACGCGGA GCCCGCGCAG CCGCACTTCC ATTGA
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Protein sequence | MRSRIAKRLP PDADKLVGLS LALFASGSRT EDRFWEAKLD ALLAKIVRNA NQTTLDAALD HLQQNHPDAY GALADMAETH SESFIVEHEG VPYEALLIAA PVLAWTRYMI PSGPLKADAA DALRAHLQAH VLAANTRVAM APFLYSIDQL PRHHVETWRI AQQLAQAATA GGNAKLNFGE LPETSPILAD PRFLLAVVAA PVGEPTFRWQ EEEHGNRIER GQCLEQWATQ GGANLSLVLP GCEFECLLPD AYYSACRDAD ERVRPHTVRT AVRYLFDTIG AAPQELRAVV AGFGERRIDE YRVGFTRRGS NDVIYGVVWP LYGRENGEPG IDEEPQETAA SDDPLEEIVA LLKETGVTEV RRHAGRFEPE YCDDCGVPLY ADPLGEIVHA EMPEDAEPAQ PHFH
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