Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1371 |
Symbol | |
ID | 6283734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1529340 |
End bp | 1530905 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642620931 |
Product | 3-hydroxy-acyl-CoA dehydrogenase |
Protein accession | YP_001895010 |
Protein GI | 187923368 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00404274 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCTCTC GCAATTTCAG CATCGAGACT ATCGGCATTG TCGGAACCGG AGCAATGGGT CGCGGCATCG CCCAGATCGC CGCGCTGGCC GGTCTCACCG TGCGTCTGTA CGACACCAAC CCTGCCGCGA TCGGCGCCGC GCGCGACTAT CTCGCCGAGA CTTTCGCCAA GCTGACCGCC AAAGGCAAGC TCGATCAGGC CCGCTCGCTT GCCGCACTTG CGAACGTAAG CGGCGCGCAG AGCATCGGCG AGTTGGCTGG TTGCGATCTG GTTGTCGAGG CGATCGTCGA GAAACTCGAC GTGAAACAGG CGCTGTTCCG CGAACTCGAG ACCGTCGTCA GTGGCCGCTG CGTGCTGGCG TCCAATACGT CGTCGCTGTC CATCACGGCG ATTGCCGCCG GCTGCAGTGA CCCGTCGCGC GTGGTCGGCT ATCACTTCTT CAATCCCGTG CCGTTGATGA AGGTCGTCGA AGTCATCGAC GGTCTGCGCA GCGACCCCGC AGCAGGCGAC GCGTTGATGA ATCTCGCGCG CCGCATGGGA CACACGCCGG TGCGCGCGAA AGATATGCCC GGCTTCATCG TGAATCACGC GGGCCGCGGC ATGAATACCG AAGGCTTGCG CGTGGCCGGT GAAGGCGTGG CGAGCTTCGC CGACATCGAC CGCATCGTGC GCGAGCAGGC GGGCTTTCGC CTCGGGCCGT TCGAGTTGCT CGATCTGACG GCGCTGGACG TCTCGCATCC GGTGATGGAG TCGATCTACC ACCAGTTTTA TGAAGAGCCG CGCTTCACGC CGTCGCCCAT TACCGGTACG AGGCTCGCGG GCGGACTGAT CGGCCGCAAG ACGGGCGAAG GCTTTTATCG CTACGAAGAC GGCAAGCAGC AGGTGCCTGC CGAAGCGCCC GCGCCGACCG GATTGCCGGC CGGCGTGTGG GTCAGCAAGC GTTATCCGCA AGCTCACGAC GCGGTCGTGC AACTCATCGA GAAAGCCGGC GTGAAGCTCG ACGACGGTGC CACGCCCGCG GCGAACTCGC TGATCGTCGT CACGCCGTTC GGCCACGACG CGACCACGGC CGCGGTCGAT GAAGCGCTGG ACGCGACCCG CGTCGTCGCA ATCGATGCGC TCTTCCCGCT CGTCGGCGCG CAACGCCGCA CACTGATGAC AACGCCCGCC ACCACGCGCA CCGCGCGTGA CACGGCGCAT GCGCTGTTCG CCGCCGACGG CGTGCCCGTC ACCGTGATCC GCGACTCGAC CGGCTTTGTC GCGCAACGCG TGGTGGCGAC TATCGTCAAC ATCGGCTGCG ACATCGCGCA AAAACAGATC GCCACACCCC AAGACATCGA TCTCGCCGTG ACACTCGGCC TCGGCTACCC GCGCGGCCCG CTAGGCCTCG GCGACGCGCT CGGCTCGACG ACCATTCTCA CGATCCTGCG CAACATGTTC AGTGTGCTTG GCGATCCGCG CTATCGCCCT TCGCCTTGGC TCGCGCGGCG AGCGCAACTG GGCATGTCGT TGACCCAACG CGATGCAGCC GACCTCGAAA CGAAGACTCA GGAGACACAA CAATGA
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Protein sequence | MTSRNFSIET IGIVGTGAMG RGIAQIAALA GLTVRLYDTN PAAIGAARDY LAETFAKLTA KGKLDQARSL AALANVSGAQ SIGELAGCDL VVEAIVEKLD VKQALFRELE TVVSGRCVLA SNTSSLSITA IAAGCSDPSR VVGYHFFNPV PLMKVVEVID GLRSDPAAGD ALMNLARRMG HTPVRAKDMP GFIVNHAGRG MNTEGLRVAG EGVASFADID RIVREQAGFR LGPFELLDLT ALDVSHPVME SIYHQFYEEP RFTPSPITGT RLAGGLIGRK TGEGFYRYED GKQQVPAEAP APTGLPAGVW VSKRYPQAHD AVVQLIEKAG VKLDDGATPA ANSLIVVTPF GHDATTAAVD EALDATRVVA IDALFPLVGA QRRTLMTTPA TTRTARDTAH ALFAADGVPV TVIRDSTGFV AQRVVATIVN IGCDIAQKQI ATPQDIDLAV TLGLGYPRGP LGLGDALGST TILTILRNMF SVLGDPRYRP SPWLARRAQL GMSLTQRDAA DLETKTQETQ Q
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