| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1355 |
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| Symbol | |
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| ID | 6281392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1515288 |
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| End bp | 1516778 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642620915 |
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| Product | NADH dehydrogenase subunit M |
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| Protein accession | YP_001894994 |
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| Protein GI | 187923352 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000992227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0345123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCTT ATCCGATTCT CAGTATTGCG ATCTGGTTGC CGATCCTCGT CGGCCTCCTG
GTCCTGGCCA TCGGTTCTGA CCAGAACCCG GCTCCCGCGC GCTGGATTGC GCTGATCGGT
TCGGTCGTCA GCTTCCTCGT GACGATCCCG TTGATTACCG GTTTTGATTC GAGCACCGCC
GATCTGCAGT TCGTCGAAAA GGCGAACTGG ATCGAGCGCT TCAACATCAC GTATCACCTG
GGTGTCGACG GCATCTCGAT GTGGTTTGTC GTGTTGACTG CATTGATCAC GGTGATCGTC
GTGATCGCCG CGTGGGAAGT GATCACGAAG AAAGTGGGTC AGTACCTGGC CGCGTTCCTG
ATCCTGTCCG GCATCATGGT CGGCGTGTTC AGTTCGGCCG ACGGCATGCT GTTCTACGTG
TTCTTCGAAG CGACGCTGAT TCCGATGTAC ATCATCATCG GCGTATGGGG TGGGGCGAAC
CGCGTCTACG CGGCGTTCAA GTTCTTCCTG TACACGCTGA TGGGCTCGCT GTTGATGCTG
GTCGCGTTGC TGTACCTGTA CATCCAGACC GGTACGTTCG ACCTCGCCAC GTGGCAGCAT
GCGCAGATCG CCATGACGCC ACAGGTGCTG ATATTCATAG CGTTCTTCAT GGCCTTCGCC
GTGAAGGTGC CGATGTGGCC GGTTCACACG TGGTTGCCTG ACGCCCACGT GGAAGCGCCG
ACCGGCGGCT CGGTCGTGCT GGCCGCGATC ATGCTGAAGC TGGGCGCCTA TGGTTTCGTG
CGCTTCTCGC TCCCCATCGC GCCCGACGCC AGCCACTTTC TGGCGCCGGT CATCGTCACG
CTTTCACTGA TCGCGGTGAT CTACATCGGT CTCGTCGCGA TGGTGCAGAC GGACATGAAG
AAGCTGGTCG CGTATTCGTC GATCGCGCAC ATGGGTTTCG TGACGCTCGG CTTCTTCATC
TTCAACCAGC TCGGCGTGGA AGGCGCGATC GTGCAGATGA TCTCGCACGG TTTCGTATCG
GGCGCGATGT TCCTGAGCAT CGGCGTGCTG TACGACCGTA TGCATTCGCG TCAGATCGCC
GATTACGGCG GCGTCGTCAA CGTGATGCCG AAGTTCGCGG CGTTCGTCAT GCTGTTCTCC
ATGGCCAATT GCGGCCTGCC GGGCACCTCC GGTTTCGTCG GCGAATTCAT GGTGATTCTG
GCTGCTGTCC AGTACAACTT CTGGATCGCG GGCGGCGCGG CAGTCACGCT GATTCTCGGC
GCGGCCTACA CGCTGTGGAT GTACAAGCGC GTGTACTTCG GCGCGATCGC CAACAATCAC
GTGAAGGGCC TGCTCGACAT CAACCGTCGC GAATTTTTCA TGCTGGCAGT GCTTGCCGCA
CTGACGCTGT TCATGGGCCT GTATCCGAAG CCCTTTACCG ATGTGATGCA CGTATCCGTG
GAAAACCTCC TCGCCCACGT TGCGCAGTCA AAGCTGCCGT TGCCTCAGTA A
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| Protein sequence | MHAYPILSIA IWLPILVGLL VLAIGSDQNP APARWIALIG SVVSFLVTIP LITGFDSSTA
DLQFVEKANW IERFNITYHL GVDGISMWFV VLTALITVIV VIAAWEVITK KVGQYLAAFL
ILSGIMVGVF SSADGMLFYV FFEATLIPMY IIIGVWGGAN RVYAAFKFFL YTLMGSLLML
VALLYLYIQT GTFDLATWQH AQIAMTPQVL IFIAFFMAFA VKVPMWPVHT WLPDAHVEAP
TGGSVVLAAI MLKLGAYGFV RFSLPIAPDA SHFLAPVIVT LSLIAVIYIG LVAMVQTDMK
KLVAYSSIAH MGFVTLGFFI FNQLGVEGAI VQMISHGFVS GAMFLSIGVL YDRMHSRQIA
DYGGVVNVMP KFAAFVMLFS MANCGLPGTS GFVGEFMVIL AAVQYNFWIA GGAAVTLILG
AAYTLWMYKR VYFGAIANNH VKGLLDINRR EFFMLAVLAA LTLFMGLYPK PFTDVMHVSV
ENLLAHVAQS KLPLPQ
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