| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1354 |
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| Symbol | |
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| ID | 6281391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1513186 |
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| End bp | 1515273 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642620914 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_001894993 |
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| Protein GI | 187923351 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0117862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0417376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGA TACTCAATGA AAACCTGCTG CTGGCGATCC CGCTGGCACC GCTGGCCGGC
TGTCTGGTTG CCGGTCTGGC CGGAAAAGCG GTAGGGCGAG CCGGTGCGCA TTCGGTCACG
ATCCTCGGCG TCGCGATCTC GTTCATCCTG TCGGCCATCG TCTTCTTCCA GGTGCTGAAC
GGCGCGAGTT TCAACGCGAC CATCTACGAA TGGATGTCGA TCGGCAAGAC GAAGTTCGAA
ATCGGCTTCC TGGTCGACTC GCTGACGGCC ATGATGATGT GCGTGGTGAC CTTCGTGTCG
CTCATGGTGC ACATCTACAC GATCGGCTAC ATGGCCGACG AAGACGGCTA CCAGCGCTTC
TTCTCGTACA TCTCGCTGTT CACGTTCTCG ATGTTGATGC TCGTGATGAG CAACAACTTC
CTGCAACTGT TCTTCGGCTG GGAAGCGGTG GGTCTGGTGT CGTATCTGCT GATCGGCTTC
TACTTCACCC GTCCCACGGC GATCTACGCC AACATGAAGG CGTTCATCGT GAACCGCATC
GGCGACTTCG GCTTTTTGCT GGGTATCGGC CTGCTGTTCG CGTTCGCCGG TTCGATGAAC
TACGGCGACG TGTTCGCGAA GCGCACCGAA CTCGCGGCAC TGAGCTTTCC GGGTACGGAC
TGGGGTCTGC TGACGGTCGC CTGTATTTGC TTGTTCATCG GTGCAATGGG CAAGTCGGCG
CAGTTTCCGC TGCACGTCTG GCTGCCGGAT TCGATGGAAG GCCCGACGCC GATCTCCGCA
CTGATTCACG CGGCAACCAT GGTGACGGCC GGTATCTTCA TGGTCACGCG CATGTCGCCG
CTGTTCGAAC TGTCGGATAC GGCGCTGTCG TTCGTCATGG TCATCGGCGC GATTACCGCG
CTGTTCATGG GCTTCCTCGG GATCATCCAG AACGACATCA AGCGCGTGGT GGCGTATTCC
ACGCTGTCGC AACTGGGTTA CATGACGGTC GCGCTGGGCG CGTCGGCTTA CTCGGTCGCC
GTGTTCCACC TGATGACGCA CGCGTTCTTC AAGGCGCTGC TGTTCCTCGG CGCGGGTTCG
GTGATCATCG GCATGCATCA CGATCAGGAC ATCCGCAACA TGGGCGGCCT GCGCAAGTAC
ATGCCGATCA CGTGGATTAC GTCGCTGGTC GGTTCGCTGG CGCTGATCGG CACGCCGTTC
TTCTCGGGCT TCTACTCGAA AGACTCGATT ATCGACGCAG TGAAACTGTC GCATCTGCCC
GGTGCAGGCT TCGCGTACTT CGCAGTGGTG GCGAGCGTCT TCGTGACCGC GCTGTATTCG
TTCCGTATGT ACTTCCTGGT GTTCCACGGC GAGGAGCGCT TCCGTGGTCC GAAGCATCCG
GAATCGCCGA TGGGCATCGA AGCGGCCGCG CATGCGCATG ACGCGCACGG CCACGATTCG
CACGGCCATG GCCACGACGC ACACGGCCAC GGTCACGACG ACCACGCTCA CGAGCCGCAC
GAAACCCCGT GGGTGGTGTG GCTGCCGCTG GTCCTGCTGG CAATCCCGTC GGTGGTGATC
GGCGCGATCG GCATCGGTCC GATGTTGTAC GGCGACTTCT TCCAGCATGG CGTGGCCTTC
GACAAGGTGA TCTTCATCGG CGAAAACCAT CCGGCGCTGC ATGAGATGGC CGAAGAGTTC
CAGGGTTGGG CGTCGATGGG CCTGCACTCG GTCGCGGGCC TGCCGGTCTG GCTGGCGCTC
GCGGGCGTGG TGGTCGCGTG GTTTCTGTAC CTGGTTCGTC CGGATCTGCC GGCTGTCATC
AAGCGCGCGT TCGGTCCGAT CTACACGCTG CTCGATAACA AGTACTACAT GGACAAGATC
AACGAAGTCG TGTTCGCGCG GGGCGCCGTG GCAATTGGCC GTGGTCTCTG GAAGGAAGGC
GACGTCGTGG TGATCGACGG CATCGTCAAC GGCAGCGCAC GCTTTATCGG CTGGTTCGCC
GGCGTGATCC GCTTCCTCCA ATCCGGCTAC ATCTATCACT ACGCGTTCGC CATGATTATC
GGCATGCTGG GGCTCCTGAC CCTGTTTGTA ACGCTCGGCG GCAAATAA
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| Protein sequence | MSTILNENLL LAIPLAPLAG CLVAGLAGKA VGRAGAHSVT ILGVAISFIL SAIVFFQVLN
GASFNATIYE WMSIGKTKFE IGFLVDSLTA MMMCVVTFVS LMVHIYTIGY MADEDGYQRF
FSYISLFTFS MLMLVMSNNF LQLFFGWEAV GLVSYLLIGF YFTRPTAIYA NMKAFIVNRI
GDFGFLLGIG LLFAFAGSMN YGDVFAKRTE LAALSFPGTD WGLLTVACIC LFIGAMGKSA
QFPLHVWLPD SMEGPTPISA LIHAATMVTA GIFMVTRMSP LFELSDTALS FVMVIGAITA
LFMGFLGIIQ NDIKRVVAYS TLSQLGYMTV ALGASAYSVA VFHLMTHAFF KALLFLGAGS
VIIGMHHDQD IRNMGGLRKY MPITWITSLV GSLALIGTPF FSGFYSKDSI IDAVKLSHLP
GAGFAYFAVV ASVFVTALYS FRMYFLVFHG EERFRGPKHP ESPMGIEAAA HAHDAHGHDS
HGHGHDAHGH GHDDHAHEPH ETPWVVWLPL VLLAIPSVVI GAIGIGPMLY GDFFQHGVAF
DKVIFIGENH PALHEMAEEF QGWASMGLHS VAGLPVWLAL AGVVVAWFLY LVRPDLPAVI
KRAFGPIYTL LDNKYYMDKI NEVVFARGAV AIGRGLWKEG DVVVIDGIVN GSARFIGWFA
GVIRFLQSGY IYHYAFAMII GMLGLLTLFV TLGGK
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