| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1348 |
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| Symbol | |
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| ID | 6282444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1506602 |
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| End bp | 1507930 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642620908 |
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| Product | NADH-quinone oxidoreductase, F subunit |
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| Protein accession | YP_001894987 |
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| Protein GI | 187923345 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.020872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00762126 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGTCTT TACACGATCG TCACATCAAA CCGCTGATTC TCGCCGGCCT GAACGGCGAT
AACTGGCATC TCGAAGACTA TGTGGCGCGC GGCGGTTACG CCCAGCTGCG CCGTATTCTG
GAAGAGAAGA TTCCGCCCGA GCAGGTGATC GCCGACGTCA AGGCGTCGGG TCTGCGTGGC
CGTGGCGGTG CAGGCTTCCC GACCGGTCTG AAGTGGAGCT TCATGCCGCG TCAATTCCCT
GGCCAGAAGT ACCTCGTCTG CAATTCGGAC GAAGGCGAGC CGGGCACGTT CAAAGACCGC
GACATCCTGC GTTTCAATCC GCATTCGCTG ATCGAAGGCA TGGCCATTGG CGCGTATGCG
ATGGGCATCA CGGTCGGCTA CAACTATATC CACGGCGAAA TCTGGGAAGT CTACAAACGC
TTTGAACAGG CGTTGGACGA AGCTCGCCGC GCCGGGTTCC TCGGCGAAAA CATCATGGGT
TCGGGCTTCT CGTTCGAACT GCATGCGCAC CACGGTTACG GCGCCTATAT CTGCGGCGAA
GAAACCGCGT TGCTCGAATC GCTGGAAGGC AAGAAAGGCC AGCCGCGCTT CAAGCCGCCG
TTCCCCGCGA GCTTCGGCGT GTACGGCAAG CCGACCACGA TCAACAACAC CGAGACGTTT
GCCGCTGTGC CGTTCCTGCT CGCAATCGGC CCGCAGAATT ACCTCGAAAT CGGCAAGCCG
AACAACGGCG GCACGAAGAT TTTCTCGGTC GCAGGCGACG TCGAACGTCC GGGCAATTAT
GAAATTCCGC TCGGCACGCC GTTCTCCACG CTGATGGAAC TGGCCGGCGG CATGCGCGGC
GTCAAGAAGA TCAAGGCCGT GATTCCTGGC GGCTCGTCGG CACCGGTGAT TCCGGGCGAC
ATCATGATGC AGACCGATAT GGACTACGAC TCGATCGCCA AAGCCGGCTC GATGCTCGGT
TCGGGCGCGG TCATCGTCAT GGATGAGACG CGTTGCATGG TGCGCTCGTT GTTGCGTCTG
TCGTATTTCT ATTACGAAGA ATCGTGTGGT CAATGCACGC CTTGCCGCGA AGGCACGGGC
TGGCTGTACC GCGTTGTGCA TCGTATCGAG CACGGGCTCG GCCGTCCGGA AGATCTGGAT
CTGCTGAACT CGGTCGCTGA AAACATCATG GGCCGCACAA TTTGCGCGCT CGGTGATGCA
GCGGCCATGC CGGTTCGCGG CATGCTCAAG CACTACTGGG ACGAATTCGA ATATCACGTC
GCCCATAAGC ATTGCCTCGT CGGCGGTCAT GCCGGCGCAG CGGCGGCGTC GGAAACCGTA
GCGGCTTGA
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| Protein sequence | MTSLHDRHIK PLILAGLNGD NWHLEDYVAR GGYAQLRRIL EEKIPPEQVI ADVKASGLRG
RGGAGFPTGL KWSFMPRQFP GQKYLVCNSD EGEPGTFKDR DILRFNPHSL IEGMAIGAYA
MGITVGYNYI HGEIWEVYKR FEQALDEARR AGFLGENIMG SGFSFELHAH HGYGAYICGE
ETALLESLEG KKGQPRFKPP FPASFGVYGK PTTINNTETF AAVPFLLAIG PQNYLEIGKP
NNGGTKIFSV AGDVERPGNY EIPLGTPFST LMELAGGMRG VKKIKAVIPG GSSAPVIPGD
IMMQTDMDYD SIAKAGSMLG SGAVIVMDET RCMVRSLLRL SYFYYEESCG QCTPCREGTG
WLYRVVHRIE HGLGRPEDLD LLNSVAENIM GRTICALGDA AAMPVRGMLK HYWDEFEYHV
AHKHCLVGGH AGAAAASETV AA
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