Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1346 |
Symbol | |
ID | 6282442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1504735 |
End bp | 1505988 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642620906 |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_001894985 |
Protein GI | 187923343 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00313693 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00709586 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGAGA TCAAGAACTA CACGCTCAAC TTCGGCCCTC AGCACCCGGC AGCGCACGGT GTGCTGCGCC TCGTGCTCGA GCTCGACGGC GAAGTCATTC AGCGCGCCGA TCCGCACATC GGTCTGCTGC ATCGCGCGAC TGAAAAGCTC GCCGAAACCA AAACATTCAT CCAGTCGGTG CCGTACATGG ACCGTCTCGA CTACGTGTCG ATGATGGTCA ACGAGCACGG CTATGTGATG GCGATCGAAA AGCTGCTCGG CATCGAAGTG CCGGTGCGCG CGCAATACAT TCGCGTGATG TTCGACGAAG TCACGCGCGT GCTGAACCAC CTGATGTGGA TCGGCGCGCA CGCGCTCGAC GTCGGCGCAA TGGCGGTGTT CCTGTACGCG TTCCGTGAGC GCGAAGACTT GATGGACGTG TACGAAGCGG TGTCCGGCGC ACGGATGCAC GCGGCTTACT ATCGTCCGGG CGGCGTCTAT CGCGATCTGC CTGACGCAAT GCCGCAATAC AAAGCGTCGA AGATTCGCAA TGCCAAGGCA TTGTCGAAGA TGAACGAGAA CCGTCAGGGT TCGCTCCTCG ACTTCATCGA CGATTTCTTC ACGCGGTTCC CGAAGTGCGT CGACGAATAC GAAACGCTGC TGACCGACAA CCGGATCTGG AAGCAACGTC TGGTCGGTAT CGGCGTGGTC AGCCCGGAAC GCGCGCTGAA TCTCGGCATG ACCGGCGCGA TGCTGCGTGG TTCGGGTATC GAATGGGATC TGCGCAAGAA GCAACCTTAT GAGGTCTATG ACAAGCTCGA TTTTGACATC CCGGTGGGGG TCAACGGCGA CTGTTATGAC CGATATTTGG TACGCGTCGA AGAAATGCGC CAGTCCACAC GCATTGTGAA ACAGTGCATT GAGTGGCTGC GTAAGAATCC CGGCCCCGTG ATGATCGACA ATCACAAGGT TGCGCCGCCG TCGCGCGTGG GCATGAAGTC GAACATGGAA GAGCTGATTC ACCACTTCAA GCTCTTCACG GAAGGCTTCC ATGTTCCGGA AGGCGAGGCA TACGCCGCGG TCGAGCATCC GAAGGGCGAG TTCGGCATCT ATCTGATCTC CGACGGCGCT AACAAGCCGT ATCGCCTGAA GATCCGCGCG CCGGGCTACG CTCACCTGTC CACGCTCGAT GAAATGGCGC GCGGTCACAT GATCGCCGAC GCCGTGACGA TCATCGGCAC GCAGGACATC GTGTTCGGCG AAGTGGATCG CTAG
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Protein sequence | MAEIKNYTLN FGPQHPAAHG VLRLVLELDG EVIQRADPHI GLLHRATEKL AETKTFIQSV PYMDRLDYVS MMVNEHGYVM AIEKLLGIEV PVRAQYIRVM FDEVTRVLNH LMWIGAHALD VGAMAVFLYA FREREDLMDV YEAVSGARMH AAYYRPGGVY RDLPDAMPQY KASKIRNAKA LSKMNENRQG SLLDFIDDFF TRFPKCVDEY ETLLTDNRIW KQRLVGIGVV SPERALNLGM TGAMLRGSGI EWDLRKKQPY EVYDKLDFDI PVGVNGDCYD RYLVRVEEMR QSTRIVKQCI EWLRKNPGPV MIDNHKVAPP SRVGMKSNME ELIHHFKLFT EGFHVPEGEA YAAVEHPKGE FGIYLISDGA NKPYRLKIRA PGYAHLSTLD EMARGHMIAD AVTIIGTQDI VFGEVDR
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