Gene Bphyt_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1343 
Symbol 
ID6284672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1503199 
End bp1503558 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content54% 
IMG OID642620903 
ProductNADH dehydrogenase subunit A 
Protein accessionYP_001894982 
Protein GI187923340 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000399955 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0050041 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAACCTCG CAGCCTATTT CCCCGTCTTG TTGTTCCTCG TTGTGGGCAC CGGTTTAGGC 
GTAGCACTGG TCAGTATCGG CAAGATCCTC GGTCCCAACA AGCCTGATAC CGAGAAGAAC
GCACCGTACG AGTGCGGCTT CGAAGCATTC GAAGATGCGC GCATGAAGTT CGACGTGCGC
TATTACCTCG TCGCCATTCT TTTCATCATT TTCGATCTTG AAACCGCGTT CCTGTTTCCG
TGGGGCGTTG CCCTGCGTGA CATCGGCTGG CCTGGCTTCT TGGCAATGAT GATTTTCCTG
CTCGAATTCC TGTTGGGCTT CGCCTATATC TGGAAGAAAG GCGGCCTCGA CTGGGAATGA
 
Protein sequence
MNLAAYFPVL LFLVVGTGLG VALVSIGKIL GPNKPDTEKN APYECGFEAF EDARMKFDVR 
YYLVAILFII FDLETAFLFP WGVALRDIGW PGFLAMMIFL LEFLLGFAYI WKKGGLDWE