Gene Bphyt_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1341 
SymboltpiA 
ID6284669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1501599 
End bp1502378 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content65% 
IMG OID642620900 
Producttriosephosphate isomerase 
Protein accessionYP_001894980 
Protein GI187923338 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000463974 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0307092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAC AACGAGCCAA GCTGGTAGTC GGTAACTGGA AGATGCACGG GCGCCTCGCC 
GAAAATGCCA CGTTGCTGCA AGCGGTGGCG CATGGTGCGG GCGAATTGCC GGCCGACGTG
CGCGTCGGCG TCTGCGTGCC GAGTCCGTAT CTCGCGCAGT CTCAATCGTT GCTGGAAGGC
AGCCGGGTGG TATGGGGCGT GCAGGACGTG TCGGCATTCA CGCATGGCGC CTATACCGGT
GAAGTGGCCG CGCCGATGGT GGTGGATTTC GGTGCCACGC TCGCGATCGT CGGGCACTCG
GAGCGCCGTG CCTATCATCG CGAAAGCGCT GAACTGGTTG CGGTGAAGAC GCAGCGCGCG
TTGGAAGCAG GGTTGACGCC GATCGTCTGC GTCGGCGAAA CGCTTGAAGA GCGCGAAGCC
GGTTTGACCG AGCAGGTGGT CGGCACGCAA CTGGACGAAG TGCTGGCGAA ATTGTCGGTG
CAAGAGGCGG CGCGGCTTGT CGTCGCATAC GAGCCGGTCT GGGCGATCGG TACCGGCAAG
AGCGCGAGTT CGGAGCAGGC GCAGGCGGTC CATGCGTTCC TGCGTGCGCG TCTGGCGGCA
AAGGGCGCGG CGGTGGCGGA TGTCCCGCTG TTGTACGGCG GTAGTGTAAA GCCGGAGAAC
GCGGAAGAAT TGTTCCGCCA GCCGGATATC GACGGTGGCC TGATCGGCGG CGCGTCGTTG
AAAGACCAGG ATTTCCTGGC GATCTGCAAG GCGGCGGCCG CAACGAGCGT GGCCGGTTAA
 
Protein sequence
MSKQRAKLVV GNWKMHGRLA ENATLLQAVA HGAGELPADV RVGVCVPSPY LAQSQSLLEG 
SRVVWGVQDV SAFTHGAYTG EVAAPMVVDF GATLAIVGHS ERRAYHRESA ELVAVKTQRA
LEAGLTPIVC VGETLEEREA GLTEQVVGTQ LDEVLAKLSV QEAARLVVAY EPVWAIGTGK
SASSEQAQAV HAFLRARLAA KGAAVADVPL LYGGSVKPEN AEELFRQPDI DGGLIGGASL
KDQDFLAICK AAAATSVAG