Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1341 |
Symbol | tpiA |
ID | 6284669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1501599 |
End bp | 1502378 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642620900 |
Product | triosephosphate isomerase |
Protein accession | YP_001894980 |
Protein GI | 187923338 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000463974 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0307092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAC AACGAGCCAA GCTGGTAGTC GGTAACTGGA AGATGCACGG GCGCCTCGCC GAAAATGCCA CGTTGCTGCA AGCGGTGGCG CATGGTGCGG GCGAATTGCC GGCCGACGTG CGCGTCGGCG TCTGCGTGCC GAGTCCGTAT CTCGCGCAGT CTCAATCGTT GCTGGAAGGC AGCCGGGTGG TATGGGGCGT GCAGGACGTG TCGGCATTCA CGCATGGCGC CTATACCGGT GAAGTGGCCG CGCCGATGGT GGTGGATTTC GGTGCCACGC TCGCGATCGT CGGGCACTCG GAGCGCCGTG CCTATCATCG CGAAAGCGCT GAACTGGTTG CGGTGAAGAC GCAGCGCGCG TTGGAAGCAG GGTTGACGCC GATCGTCTGC GTCGGCGAAA CGCTTGAAGA GCGCGAAGCC GGTTTGACCG AGCAGGTGGT CGGCACGCAA CTGGACGAAG TGCTGGCGAA ATTGTCGGTG CAAGAGGCGG CGCGGCTTGT CGTCGCATAC GAGCCGGTCT GGGCGATCGG TACCGGCAAG AGCGCGAGTT CGGAGCAGGC GCAGGCGGTC CATGCGTTCC TGCGTGCGCG TCTGGCGGCA AAGGGCGCGG CGGTGGCGGA TGTCCCGCTG TTGTACGGCG GTAGTGTAAA GCCGGAGAAC GCGGAAGAAT TGTTCCGCCA GCCGGATATC GACGGTGGCC TGATCGGCGG CGCGTCGTTG AAAGACCAGG ATTTCCTGGC GATCTGCAAG GCGGCGGCCG CAACGAGCGT GGCCGGTTAA
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Protein sequence | MSKQRAKLVV GNWKMHGRLA ENATLLQAVA HGAGELPADV RVGVCVPSPY LAQSQSLLEG SRVVWGVQDV SAFTHGAYTG EVAAPMVVDF GATLAIVGHS ERRAYHRESA ELVAVKTQRA LEAGLTPIVC VGETLEEREA GLTEQVVGTQ LDEVLAKLSV QEAARLVVAY EPVWAIGTGK SASSEQAQAV HAFLRARLAA KGAAVADVPL LYGGSVKPEN AEELFRQPDI DGGLIGGASL KDQDFLAICK AAAATSVAG
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