| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1339 |
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| Symbol | |
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| ID | 6280971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1498139 |
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| End bp | 1500295 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642620898 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001894978 |
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| Protein GI | 187923336 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0982499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0498481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATGT TCAATAAGAT CGTCAAAGAA TTTCAGTGGG GACAACATAA GGTTCGCCTC
GAAACCGGCG AGATCGCTCG CCAGGCGAGC GGTGCGGTAA TCGTCGACGT CGAAGATACC
GTGGTGCTGG CCACCGTGGT CGGCGCCAAG ACGGCCAAGC CGGGTCAGGA CTTCTTCCCG
CTGACCGTCG ACTACCTCGA AAAGACCTAC GCCGCCGGCA AGATCCCGGG TGGCTTCTTC
CGCCGCGAAG GTCGTCCGTC GGAAGGCGAA ACGCTGATCT CGCGCCTGAT CGACCGTCCG
CTGCGTCCGC TGTTCCCGGA AGGCTTCTAC AACGAAGTCC AGGTCGTGAT CCACGTCCTG
TCGCTGAACC CCGAAATTCC CGCTGACATC CCCGCGCTGA TCGGCGCGTC GGCGGCGCTC
GCCGTGTCGG GTCTGCCGTT CAACGGCCCG GTCGGCGCAG CACGCGTGGC CTACATCAAC
AACGAGTACG TGTTGAACCC GACGCGTCCG CAAATGAAGG AATCGGCGCT CGACCTGATC
GTCGCCGGTA CGGAACGCGC GGTGCTGATG GTGGAATCGG AAGCGCAGCA ACTGAGCGAA
GAAGTCATGC TCGGCGGCGT GGTGTTCGGT CATGAGCAAA TGCAGATCGC GATCGACGCA
ATCCATGATC TGGTCCGCGA AGGCGGCAAG CCGGAATGGG ATTGGCAACC GGCGGCGAAG
AACGAGCCGC TGATCGCACG CGTGACGGAA CTGGCGCAAG CCGATCTGCT CGCCGCCTAT
CAACTGCGCG ACAAGCAAGC CCGTTCGGCC AAGCTGAAGG AAGTCTACGC AGCAACGTCG
AAGAAGCTGG AAGAAGACGC TGCAGCAGGC GGCACCGTCG CAGCCGACAA GGCAACCGTC
GGCAACGTGC TGTTCGATAT CGAGGCGAAG ATCGTCCGTA CGCAGATCCT GAACGGCGAG
CCGCGTATCG ACGGCCGCGA CACGCGCACC GTGCGCCCGA TCGAAATCCG TACCGGCGTG
CTGCCGCGTA CGCACGGCTC GGCACTGTTC ACGCGCGGCG AAACGCAGGC CATGGTGGTC
GCAACGCTGG GCACGAAGGG CGACGAGCAG AACATCGACG CGCTCGAAGG CGAGTACCGC
GAACGCTTCA TGCTCCACTA CAACATGCCT CCGTTCGCGA CCGGCGAAAC GGGCCGCGTC
GGTTCGCCGA AGCGCCGTGA AATCGGTCAC GGCCGTCTGG CCAAGCGCGC GCTGGCTGCA
TGCCTGCCGA GCGCCGACGA ATTCGGCTAC TCGATTCGCG TCGTGTCGGA AATCACGGAA
TCGAACGGTT CCTCGTCCAT GGCTTCGGTG TGCGGCGGCT GCCTCGCGCT GATGGACGCC
GGCGTGCCGA TGAAGGCGCA CGTCGCCGGC ATCGCCATGG GCCTGATTCT GGAAGGCAAC
AAGTTTGCCG TGCTGACCGA CATCCTCGGC GACGAAGATC ACCTCGGCGA CATGGACTTC
AAGGTGGCGG GTACGGAACA AGGCGTGACC GCGCTGCAGA TGGACATCAA GATCCAGGGC
ATCACCAAGG AAATCATGCA GGTCGCCCTC GCGCAAGCGA AGGAAGGCCG TATGCATATC
CTGAGCAAGA TGACCTCGGC GGTCTCGGGC GCGAACACGG TGCTGTCGGA CTACGCACCG
CGCATGATCA CCATCAAGAT CAATCCGGAA AAGATCCGCG ACGTGATCGG CAAGGGTGGT
TCGGTGATCC GCGCGCTGAC CGAAGAAACC GGCACGACGA TCGATATTTC GGACGACGGC
GTCGTCACCA TCGCGAGCAC GAGCAGCGAA GGCATGGCCG AAGCGAAGAA GCGTATCGAG
AACATCACGC TGGAAGTCGA AGTGGGCCAG GTGTACGAAG GCACCGTGCT CAAGCTGCTC
GATTTCGGCG CGATCGTGAA CATCCTGCCG GGCAAGGATG GTCTGCTGCA CATCTCCGAA
ATCGCCAACG AGCGTATCAA GGACATCAAC GACTACCTGA AGGATGGCCA GCAAGTGAAG
GTCAAGGTCA TCCAGACGGA CGAAAAGGGC CGCGTGCGTT TGTCGGCCAA GGCGTTGCTG
AACGAAGGCG CGAATGGCGC AAGCGGCGCG CCGCAAGGCG AGCCGACGCC GCAGTAA
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| Protein sequence | MTMFNKIVKE FQWGQHKVRL ETGEIARQAS GAVIVDVEDT VVLATVVGAK TAKPGQDFFP
LTVDYLEKTY AAGKIPGGFF RREGRPSEGE TLISRLIDRP LRPLFPEGFY NEVQVVIHVL
SLNPEIPADI PALIGASAAL AVSGLPFNGP VGAARVAYIN NEYVLNPTRP QMKESALDLI
VAGTERAVLM VESEAQQLSE EVMLGGVVFG HEQMQIAIDA IHDLVREGGK PEWDWQPAAK
NEPLIARVTE LAQADLLAAY QLRDKQARSA KLKEVYAATS KKLEEDAAAG GTVAADKATV
GNVLFDIEAK IVRTQILNGE PRIDGRDTRT VRPIEIRTGV LPRTHGSALF TRGETQAMVV
ATLGTKGDEQ NIDALEGEYR ERFMLHYNMP PFATGETGRV GSPKRREIGH GRLAKRALAA
CLPSADEFGY SIRVVSEITE SNGSSSMASV CGGCLALMDA GVPMKAHVAG IAMGLILEGN
KFAVLTDILG DEDHLGDMDF KVAGTEQGVT ALQMDIKIQG ITKEIMQVAL AQAKEGRMHI
LSKMTSAVSG ANTVLSDYAP RMITIKINPE KIRDVIGKGG SVIRALTEET GTTIDISDDG
VVTIASTSSE GMAEAKKRIE NITLEVEVGQ VYEGTVLKLL DFGAIVNILP GKDGLLHISE
IANERIKDIN DYLKDGQQVK VKVIQTDEKG RVRLSAKALL NEGANGASGA PQGEPTPQ
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