Gene Bphyt_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1335 
Symbol 
ID6280967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1494315 
End bp1494950 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content66% 
IMG OID642620894 
ProductCarbonate dehydratase 
Protein accessionYP_001894974 
Protein GI187923332 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.144565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0709099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCC CCAAACGCCT GCTGGTCGCC AACGTCGCCT GGGCGCATGA AACCGCCGTG 
CGCAACCCCG AGTTTTTTCG CGATCTGGTG CGAGGCCAAA ATCCCCACGT ACTGTGGATC
GGCTGCTCGG ACAGCCGCGT GCCGGCCGAA ACCATCACGC ATTGCGAACC CGGCGACCTT
TTCGTCCACC GCAACATTGC CAACCTCTTT CAGCCCGACG ACGACAATTC GGCGAGCGTC
CTCGAATATG CGGTGAAGGT GCTGAAGGTC GGTCATGTGA TCGTCTGCGG CCACTACGGG
TGCGGCGGCG TACGCGCCGC GCTGCTGCCG CCCGAGCCGA GCCTGCCGCA TGTGAACCGG
CGGATCGCAC CGCTTTGCAC GCTCGCCAAA GCGCATCGCG AAGAACTGCA GGGTCACGAG
GAAGAGCGTG AGCGCGTCAA CCGTCTCGCC GAACTGAACG TGCTCGAACA GGTGCGCGGG
TTACGCGCGC ACCCCATCGT GCGGGACGCC GACGCGGCGC CGCTCGTGCA CGGCTGGATC
TTCGCGCTCG AAGACGGGCG CATCAAAGTC CTCACGTCCG GCTACGACGC CGACGACGCG
ATGACCTGCG CGACCGCCGC CCACAGCGCC GCCTAG
 
Protein sequence
MNRPKRLLVA NVAWAHETAV RNPEFFRDLV RGQNPHVLWI GCSDSRVPAE TITHCEPGDL 
FVHRNIANLF QPDDDNSASV LEYAVKVLKV GHVIVCGHYG CGGVRAALLP PEPSLPHVNR
RIAPLCTLAK AHREELQGHE EERERVNRLA ELNVLEQVRG LRAHPIVRDA DAAPLVHGWI
FALEDGRIKV LTSGYDADDA MTCATAAHSA A