| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1333 |
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| Symbol | |
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| ID | 6280965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1490970 |
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| End bp | 1492517 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642620892 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001894972 |
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| Protein GI | 187923330 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.145859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.128519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA AACTGATCAT ATTCGACACC ACGTTGCGAG ACGGCGAACA ATCGCCCGGC
GCGTCGATGA CGAAGGAAGA GAAAATCCGT ATCGCCAAGC AACTCGAACG GATGAAAGTG
GACGTGATCG AAGCAGGCTT CGCGGCAAGC TCGAACGGCG ACTTCGATTC GATCCATACG
ATCGCGGGCC TGATCAAGGA CAGCACGGTC TGCTCGCTCG CCCGCGCGAA CGACAAAGAC
ATTCAGCGCG CGGCCGACGC GCTCAAACCC GCCGATCACT TCCGCATCCA CACGTTCATT
GCAACCTCGC CGTTGCACAT GGAAAAGAAG CTGCGCATGA CGCCGGACCA GGTGTTCGAG
CAGGCGAAGC TGGCCGTGCG TTTCGCCCGC AAATTCACCA ACGACGTCGA GTTCTCGCCG
GAAGACGGCA GCCGCTCGGA TATGGATTTC CTGTGCCGCG TGCTGGAAGC GGTGATCGCC
GAAGGCGCGA CCACCATCAA CATCGCGGAT ACGGTCGGCT ATGGCGTGCC GGAGTTGTAC
GGCCAGCTCG TGAAAACGCT GCGCGAGCGC ATTCCGAACT CGGATAAAGC GGTGTTTTCG
GTGCATTGCC ATAACGACCT CGGCATGGCG GTGGCGAACT CGCTGGCCGG TGTGCAGATT
GGCGGCGCGC GTCAAGTGGA ATGCACGATC AACGGGCTTG GCGAGCGCGC GGGCAACACG
TCGCTCGAAG AAATCGTGAT GGCTGTGAAA ACCCGCAAGG ATTACTTCGG GCTCGATATC
GGTCTCGATA CCACGCAGAT CGTGCCGGCT TCCAAGCTGG TGTCGCAGAT CACCGGTTTC
GTCGTGCAGC CGAACAAGGC GGTGGTCGGC GCGAACGCTT TTGCGCACGC ATCGGGCATT
CACCAGGACG GCGTGCTGAA GGCACGTGAC ACCTATGAAA TCATGCGCGC CGAAGACGTG
GGCTGGAGCG CGAACAAGAT CGTGCTCGGC AAGCTGTCGG GCCGTAACGC GTTCAAGCAG
CGTCTGCAGG AACTGGGTAT CGCGCTGGAT AGCGAAGCGG AATTGAACAC GGCGTTTGCG
CGCTTCAAGG AACTGGCCGA CCGCAAGTCG GAAATCTTCG ACGAAGACAT TATCGCGATC
GTCACGGAAG AATCCGCCGA AGCGCAGGAG AGGGAGCACT ACAAGTTCCT GTCGCTGTCG
CAACACTCGG AAACCGGCGA GCAACCGCAC GCCAGGATCG TGTTCTCGGT GGAAGGCAAG
GAAATAACCG GCGAAGCGCG CGGCAACGGT CCCGTCGACG CCACGCTGAA CGCGATCGAA
ACGGAAGTGG GTAGCGGCTC GGAACTGCTG CTGTATTCGG TGAACGCGAT CACCACCGGT
ACGCAGGCGC AAGGCGAAGT GACCGTGCGT CTGTCGAAGA GCGGACGTAT CGTCAACGGC
GTGGGCACCG ATCCGGATAT CGTCGCCGCT TCGGCCAAGG CGTACATCTC TGCGCTCAAC
AAGCTGTATT CGAACGCGGA CAAGTTGAAT CCGCAACGTT CGGAGTAA
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| Protein sequence | MSDKLIIFDT TLRDGEQSPG ASMTKEEKIR IAKQLERMKV DVIEAGFAAS SNGDFDSIHT
IAGLIKDSTV CSLARANDKD IQRAADALKP ADHFRIHTFI ATSPLHMEKK LRMTPDQVFE
QAKLAVRFAR KFTNDVEFSP EDGSRSDMDF LCRVLEAVIA EGATTINIAD TVGYGVPELY
GQLVKTLRER IPNSDKAVFS VHCHNDLGMA VANSLAGVQI GGARQVECTI NGLGERAGNT
SLEEIVMAVK TRKDYFGLDI GLDTTQIVPA SKLVSQITGF VVQPNKAVVG ANAFAHASGI
HQDGVLKARD TYEIMRAEDV GWSANKIVLG KLSGRNAFKQ RLQELGIALD SEAELNTAFA
RFKELADRKS EIFDEDIIAI VTEESAEAQE REHYKFLSLS QHSETGEQPH ARIVFSVEGK
EITGEARGNG PVDATLNAIE TEVGSGSELL LYSVNAITTG TQAQGEVTVR LSKSGRIVNG
VGTDPDIVAA SAKAYISALN KLYSNADKLN PQRSE
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