| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1328 |
|---|
| Symbol | |
|---|
| ID | 6284760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1485407 |
|---|
| End bp | 1487170 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642620887 |
|---|
| Product | acetolactate synthase 3 catalytic subunit |
|---|
| Protein accession | YP_001894967 |
|---|
| Protein GI | 187923325 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0958781 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGC CCAGCGCGGA ATTCTCCACG TCGGATACGA CACCCCATCC CGAAGCTGAC
TCTATCGGCG CCACCGTGCT CATGAAGGCA CTGGCCGACG AAGACGTCGA GTTTGTGTGG
GGCTATCCCG GCGGCTCGGT ACTCTACATT TACGACGAGC TGTACAAGCA GGACAAGTTC
CAGCATATCC TCGTGCGCCA CGAGCAGGCC GCGGTCCACG CCGCCGACGC TTATTCGCGT
TCCACCGGCA AGGTCGGTGT GTGCCTCGTG ACCTCCGGCC CCGGCGTCAC CAATGCGGTG
ACCGGCATCG CCACCGCGTA CATGGATTCG ATTCCCATGG TGGTGATCAG CGGCCAGGTG
CCGACTGCCG CGATCGGCCA GGATGCGTTC CAGGAATGCG ACACGGTCGG TATCACGCGT
CCCTGCGTGA AGCACAACTT CCTCGTGAAG GACGTGCGCG ACCTCGCCGC TACCGTCAAG
AAAGCGTTTT TTATTGCCCG TACCGGCCGT CCCGGCCCGG TGCTGATCGA CATTCCGAAA
GACGTCTCGA AGGCGCCTTG CCAGTACGAA CCGCTCAAGA CCGTTTCGCT GCGCTCGTAC
AACCCGGTCA CGAAGGGCCA CTCCGGCCAG ATCCGCAAAG CGGTCTCGCT GTTGCTGTCG
GCCAAGCGCC CGTACATCTA CACCGGCGGC GGCATCATTC TCGCGGATGC ATCGCGTGAG
CTGAACCAGT TCGCCGATCT GCTCGGCTAT CCCGTTACTA ACACGTTGAT GGGGCTGGGC
GGCTACCGCG CGAGCGACAA GAAATTCCTC GGCATGCTCG GCATGCACGG CACGTACGAA
GCCAACATGG CGATGCAGCA CTGCGACGTG CTGATCGCGA TCGGCGCGCG CTTCGACGAC
CGTGTGATCG GCGACCCGGC GCACTTCTCG TCGCGTCCGC GCAAGATCAT CCATATCGAC
ATCGATCCTT CCTCCATTTC CAAGCGCGTC AAGGTCGACA TTCCGATCGT CGGCGACGTG
AAGGAAGTGC TCAAGGAGCT GATCGAGCAG TTGCAAACGG CCGAGCATGG CCCGGACACC
GCGGCGCTCG CCGACTGGTG GAAGGACATC GAAGCCTGGC GCGCGAAAGA CTGCCTCAAG
TTCGACCGCA AGAGCGACAT CATCAAGCCG CAGTACGTGG TGGAAAAGGC GTGGGAACTG
ACCGACGGCA ATGCTTTCGT GTGTTCCGAC GTCGGCCAGC ATCAGATGTG GGCGGCGCAG
TTCTATCGCT TCAACAAGCC GCGCCGCTGG ATTAATTCCG GCGGTCTCGG CACGATGGGC
TTCGGCCTGC CGGCGGCGAT GGGCGTGAAG ATGGCGCACC CGGATGACGA CGTGCTCTGC
ATCACGGGCG AAGGCTCGAT CCAGATGTGT ATTCAGGAGC TCTCCACCTG CAAGCAGTAC
GAGACGCCGG TGAAGATCAT TTCGCTGAAC AACCGCTATC TGGGCATGGT GCGCCAGTGG
CAGCAGATCG AATACAGCAA GCGCTATTCG CATTCGTACA TGGATGCGCT GCCGGATTTC
GTGAAGCTCG CCGAAGCGTA CGGCCACGTC GGCATGCGTA TCGAGCGCAC GGCAGATGTG
GAGCCGGCGC TCAAGGAAGC GCTGCGCCTG AAAGATCGCA CGGTGTTTCT CGATTTCCAG
ACCGATCCGA CCGAAAACGT CTGGCCGATG GTCCAGGCCG GCAAGGGCAT CACCGAGATG
CTCATGGGTT CGGAAGATCT ATAA
|
|---|
| Protein sequence | MNMPSAEFST SDTTPHPEAD SIGATVLMKA LADEDVEFVW GYPGGSVLYI YDELYKQDKF
QHILVRHEQA AVHAADAYSR STGKVGVCLV TSGPGVTNAV TGIATAYMDS IPMVVISGQV
PTAAIGQDAF QECDTVGITR PCVKHNFLVK DVRDLAATVK KAFFIARTGR PGPVLIDIPK
DVSKAPCQYE PLKTVSLRSY NPVTKGHSGQ IRKAVSLLLS AKRPYIYTGG GIILADASRE
LNQFADLLGY PVTNTLMGLG GYRASDKKFL GMLGMHGTYE ANMAMQHCDV LIAIGARFDD
RVIGDPAHFS SRPRKIIHID IDPSSISKRV KVDIPIVGDV KEVLKELIEQ LQTAEHGPDT
AALADWWKDI EAWRAKDCLK FDRKSDIIKP QYVVEKAWEL TDGNAFVCSD VGQHQMWAAQ
FYRFNKPRRW INSGGLGTMG FGLPAAMGVK MAHPDDDVLC ITGEGSIQMC IQELSTCKQY
ETPVKIISLN NRYLGMVRQW QQIEYSKRYS HSYMDALPDF VKLAEAYGHV GMRIERTADV
EPALKEALRL KDRTVFLDFQ TDPTENVWPM VQAGKGITEM LMGSEDL
|
|---|
| |