| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1327 |
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| Symbol | |
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| ID | 6284759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1484482 |
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| End bp | 1485045 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642620886 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_001894966 |
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| Protein GI | 187923324 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0987606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATCAG ACAAGGAACT CGCCGATTTT CTGGCGGGCG TCGAAAGGCG CGCATTCAAG
CAGACGGTCT ACGCCGTGCG GGACGACGAC GCCTCGCTGG ATATCGTGCA GGACGCGATG
ATCAAGCTCG CCGAAAAATA CGGCGACCGT CCGGCGGCCG AACTTCCGCT GCTGTTTCAG
CGTATTCTGC AGAATGCGAT GCACGACTAT TTCCGTCGTG CCAAAGTACG CAATACTTGG
GTCAGTCTCT TCTCGTCGCT CGGCAACGCC GACGACGAAG ATTTCGACCC GCTCGAAACC
TTCGAGGCCC AGCAGGGCTC GGCGGGCTCC GAGAGCAACG AACAGAAACT CGAACGCGAA
CAGGTCCTGC AGTTAATCGA CGACGAGATC CAAAAGTTAC CGGCACGTCA ACGGGAGGCG
TTTCTCATGC GTTATTGGGA AGATATGGAT GTCGCCGAGA CTGCCGCCGC TATGGGCTGC
TCCGAAGGCA GTGTGAAAAC GCACTGCTCG CGGGCCACCC ACACGCTGGC GCAAGCGCTC
AAGGCCAAAG GAATCACGCT ATGA
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| Protein sequence | MASDKELADF LAGVERRAFK QTVYAVRDDD ASLDIVQDAM IKLAEKYGDR PAAELPLLFQ
RILQNAMHDY FRRAKVRNTW VSLFSSLGNA DDEDFDPLET FEAQQGSAGS ESNEQKLERE
QVLQLIDDEI QKLPARQREA FLMRYWEDMD VAETAAAMGC SEGSVKTHCS RATHTLAQAL
KAKGITL
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