| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1302 |
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| Symbol | upp |
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| ID | 6282966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1460245 |
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| End bp | 1460895 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642620861 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_001894941 |
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| Protein GI | 187923299 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0489544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.116474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCAGG ACAGCCGTTT TCCCAATCTC TTCATCCTCG ATCACCCGCT GATCCAGCAC
AAGCTGTCGC ATATGCGCGA CCGGGATACC TCGACTCGCA CGTTCCGCGA ACTGCTGCGC
GAAATCACGC TGCTGATGGG CTATGAAATC ACCCGCAACC TGCCCATGAC CACGCGCCGC
CTGACCACGC CGCTCGTCGA GATCGACGCG CCGGTGATCG CCGGCAAGAA ACTGGCGATC
GTGCCGGTGC TGCGGGCCGG CATCGGCATG TCGGACGGCC TGCTGGAACT GGTGCCGTCG
GCGCGGGTGG GCCACATCGG CGTGTATCGC GCCGAGGACC ATCGGCCGGT GGAATATCTG
GTGCGCCTGC CCGACCTCGA AGACCGCGTG TTCATTCTGT GCGATCCGAT GGTCGCGACC
GGCTATTCCG CCGTGCACGC GGTCGACGTG CTCAAGCGCC GCAATGTGGC CGGCGAGAAC
ATCATGTTCC TCGCGCTGGT CGCCGCGCCC GAAGGCGTGC AGGTGTTCCA GGACGCCCAT
CCGGACGTCA AGCTGTATGT CGCCTCGCTC GATTCGCATC TGAACGAGCA TGCGTACATC
GTGCCGGGTC TCGGCGACGC CGGCGACCGT CTGTTCGGCA CGAAGAACTG A
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| Protein sequence | MTQDSRFPNL FILDHPLIQH KLSHMRDRDT STRTFRELLR EITLLMGYEI TRNLPMTTRR
LTTPLVEIDA PVIAGKKLAI VPVLRAGIGM SDGLLELVPS ARVGHIGVYR AEDHRPVEYL
VRLPDLEDRV FILCDPMVAT GYSAVHAVDV LKRRNVAGEN IMFLALVAAP EGVQVFQDAH
PDVKLYVASL DSHLNEHAYI VPGLGDAGDR LFGTKN
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