Gene Bphyt_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1297 
Symbol 
ID6283063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1455004 
End bp1455468 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID642620856 
Productiojap-like protein 
Protein accessionYP_001894936 
Protein GI187923294 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.605705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0750793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTC GCAAACTGCA ACGCGTGATC GTCGACGCTC TCGAAGACGT CAAAGCGCAA 
GACATCAAGG TGTTCAACAC CAGCCACCTG ACCGCGCTGT TCGATCGCGT GATCGTCGCG
AGCGGCACCT CCAATCGCCA GACCAAGGCG CTCGCTTCGA GCGTGCGCGA GAGCGTCAAG
GAAAACGGCG GCGACATCGT CAGTACCGAG GGCGAGGACG TCGGCGAATG GGTGCTGGTG
GATTGCGGCG ACGCGATCGT GCACATCCTG CAACCGGCGC TGCGCCAGTA CTACAACCTC
GAAGAAATCT GGGGCGACAA GCCGGTGCGC ATCAAGCTGT CCACGCCGGA TCCGTTCGGC
GGCGCGCGCT CGAGCGAACC CGATGAAGAC GAGGACGAGG ACGAACTCGA AGCAGCGCCG
GCCGTGAAGA AGCCCGCGCG CAAGACGGCC GCACGCCGCA AGTAA
 
Protein sequence
MDIRKLQRVI VDALEDVKAQ DIKVFNTSHL TALFDRVIVA SGTSNRQTKA LASSVRESVK 
ENGGDIVSTE GEDVGEWVLV DCGDAIVHIL QPALRQYYNL EEIWGDKPVR IKLSTPDPFG
GARSSEPDED EDEDELEAAP AVKKPARKTA ARRK