| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1294 |
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| Symbol | |
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| ID | 6283060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1451981 |
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| End bp | 1453450 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642620853 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_001894933 |
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| Protein GI | 187923291 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.229063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0967279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAG AAATCCTGAT CAATGTCACG CCGCAGGAAA CGCGCGTCGC GCTGGTCCAG
CAAGGCGCCG TCCAGGAACT TCACGTCGAA CGAACGCTGT CGCGTGGCCG CGTCGGCAAC
GTCTATCTCG GCAAGGTCGT ACGCGTGTTG CCGGGCATGC AATCCGCCTT CATCGACATC
GGTCTGGAAC GCGCCGCGTT CCTTCACGTC GCCGACATCT GGCACCCGCG CATTGCCGGC
GAGCCGCAGC ATCAGACACC GCATCAGCCG ATCGAGAAAA TCGTCTTCGA AGGCCAGACG
CTGATGGTGC AGGTCGTGAA GGATCCGATC GGCACCAAGG GCGCACGGCT ATCCACGCAA
GTGAGCATTG CCGGGCGCAC GCTCGTGTAT CTGCCGCAGG AGCCGCATAT CGGCATCTCG
CAGAAGATCG AGAGCGAAGC CGAACGTGAA GCCGTGCGTG CGCGTCTGAC CGCCGTGCTG
CCCGCCGATG AGAAAGGCGG CTACATCGTG CGCACCATCG CGGAAGATGC GACCAGCGAA
GAGCTGGCCG GCGACGTCGC GTATCTGCGC AAGACGTGGG CGACGATTCT GTCGCAAGGT
CAGCGCATGC CGCCAACCAG TCTGCTGTAT CAGGATCTGA ATCTCGCGCA ACGCGTGCTG
CGCGATTTCG TCAACGACGA GTCGTCGCGC ATTCAGGTCG ACTCGCGCGA GACGTATCAG
ATGCTGGCCG ATTTCGCGGC CGAGTTCACG CCGGCGGTGT CGTCCAAGCT GCACCACTAC
ACCGGCGAGC GGCCGCTCTT CGATCTGTAC AACATCGAGG CGGAAATTCA GCGCGCGTTG
TCGCGCCGGG TGGATCTGAA GTCAGGCGGT TATCTCGTGA TCGACCAGAC CGAAGCGATG
ACGACCATCG ACGTGAATAC CGGCGGCTAC GTCGGGGCGC GCAACTTCGA CGATACGATC
TTCAAGACCA ACCTCGAAGC CGCGCACACC ATTGCGCGGC AATTGCGTCT GCGCAATCTG
GGCGGCGTGA TCATTATCGA CTTTATCGAT ATGGAGAACG TCGAGCATCG CGATCAGGTG
CTGGGCGAAT TGAAGAAGGC GCTGTCGCGC GATCGCACGC GTGTGACGGT GAACGGGTTC
TCGCAGCTCG GCCTCGTGGA GATGACGCGC AAGCGTACGC GTGAGTCTCT CGCGCATGTG
CTGTGCGAGC CTTGTCCGGT TTGCCAGGGC AAGGGGCAGG TCAAGACGCC GCGAACGGTG
TGCTACGACG TGCTGCGCGA GATTCTGCGC GAGTCGCGGC AGTTCAATCC GCGCGAGTTT
CGCGTGGTGG CGTCGCAGCA GGTGATCGAT CTGTTTCTCG AGGAAGAGTC GCAGCATCTG
GCGATGCTGA TTGATTTTAT TGGCAAGCCG GTGTCGCTGC AGGTGGAGTC GAATTTGAGT
CAGGAGCAGT ACGATATTGT GCTGATGTGA
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| Protein sequence | MNEEILINVT PQETRVALVQ QGAVQELHVE RTLSRGRVGN VYLGKVVRVL PGMQSAFIDI
GLERAAFLHV ADIWHPRIAG EPQHQTPHQP IEKIVFEGQT LMVQVVKDPI GTKGARLSTQ
VSIAGRTLVY LPQEPHIGIS QKIESEAERE AVRARLTAVL PADEKGGYIV RTIAEDATSE
ELAGDVAYLR KTWATILSQG QRMPPTSLLY QDLNLAQRVL RDFVNDESSR IQVDSRETYQ
MLADFAAEFT PAVSSKLHHY TGERPLFDLY NIEAEIQRAL SRRVDLKSGG YLVIDQTEAM
TTIDVNTGGY VGARNFDDTI FKTNLEAAHT IARQLRLRNL GGVIIIDFID MENVEHRDQV
LGELKKALSR DRTRVTVNGF SQLGLVEMTR KRTRESLAHV LCEPCPVCQG KGQVKTPRTV
CYDVLREILR ESRQFNPREF RVVASQQVID LFLEEESQHL AMLIDFIGKP VSLQVESNLS
QEQYDIVLM
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