| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1288 |
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| Symbol | |
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| ID | 6280996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1446692 |
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| End bp | 1448029 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642620847 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001894927 |
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| Protein GI | 187923285 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.238926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0632416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAT CGCTGGCTGG GCTACAGTCG AACTATCGTG AAGAATTGCG CGACTACCGG
TTGCTGCGCA GCAAGGCCGG CGGTCTGACC GTGATCGTGC TTGTGCTGAT GGGCGTGGCG
CTGGACTATG TCGTGTATCC GGCCGAGCAG AAGCGCTTTG CCATCGTTCG GATACTGACC
AGCGCGGCCA TCGGCCTCGC ATTGCTCTCG CTTTACACGC AAACGGGCAA ACGCCACGTG
CAGGTCATCA CCTTCTTCTG GCTGCTGCTG CCGCAGGCAA TGATCTCGTG GATGATTTAT
GTCACCCAGG GTGGGGAGTC GCTGTTCTAT GCCGGACTCA TGCTGACGAT CTTCGCGGTC
GGGATCCTGT TCCCCTCCGG CTACTGGCAG ACGCTGGCAT TCGGCCTGGC CACCGTCTTG
CTCTATTACG TCGCCTGCGC GGCACATCCG GGCGGCATCC AGAACCCAAG CAAGTTTCAG
TTCCAGCTCA TCCTGATCTT CTTCTGCGCG TTGGCCAGTT CCATTTACAC CTACTTCAAC
GAGAAGGGCC GTTTCCAGCT TTTCCGTTTG AAGGATGAGG TGGCGCACAA AAACGACCAG
CTCGCCCTGA CCAATGAAAA CCTCGCGCAG ATCAAGGGCC AGCTGCTGCA GCAGGAGAAG
ATGGCTGCGA TCGGCACGTT GTCCGCGGGG CTGCTCCACG AGGTCAACAA CCCGGTGAAC
TTCTGCCTGA TGGCCATCGA AATAGCCATG GAGGAACCGC AGGTCAAGGA CAGCGCGTCG
CTGCAGGAGT GCCTGACCGA CGTCAAGCAG GGCATGCACC GCATCCAGCA TATCGTGTCG
GACCTGAAGA CCTTTGCTTA CCGCAAGCCC GGCGCGGCGG CGGACGACGT GCCGTTCCTG
TTCGAAAAGG CCCTTGACTC GTCGATCCGG CTGAGCGCGC ATGAACTGCG CGGCGTGAGC
GTCACGCGCG AGCTGCCTGG CGACACGCTT GTGCTGGGCG ACGAAGCCGC CATCATCGGC
GTGCTCATCA ACCTGTTCTC GAATGCCGCT CTGGCCATGC AGAAGGCCGG CACCGTATCG
CCGAAGGTCC ATGTCACGGC GCAATGGCGG GACGACCGGC TGCATGTGAA TGTGCGCGAC
AACGGCCCGG GGATCGCCGC GGAGAATCTG GCGCGGGTGT TCGAACCGTT CTTCACGACC
CGCGAAGTCG GCCAGGGCCT CGGCCTTGGC CTGTCAATCA GTTATGCGGT GGTGGAGCGG
CACGGCGGCA CACTGTTTGC GGAAAGCCAG TTGGGCGAGT GGACAGCGTT CAACTTCGAC
CTGCCGCGTC TGGAGTGA
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| Protein sequence | MTTSLAGLQS NYREELRDYR LLRSKAGGLT VIVLVLMGVA LDYVVYPAEQ KRFAIVRILT
SAAIGLALLS LYTQTGKRHV QVITFFWLLL PQAMISWMIY VTQGGESLFY AGLMLTIFAV
GILFPSGYWQ TLAFGLATVL LYYVACAAHP GGIQNPSKFQ FQLILIFFCA LASSIYTYFN
EKGRFQLFRL KDEVAHKNDQ LALTNENLAQ IKGQLLQQEK MAAIGTLSAG LLHEVNNPVN
FCLMAIEIAM EEPQVKDSAS LQECLTDVKQ GMHRIQHIVS DLKTFAYRKP GAAADDVPFL
FEKALDSSIR LSAHELRGVS VTRELPGDTL VLGDEAAIIG VLINLFSNAA LAMQKAGTVS
PKVHVTAQWR DDRLHVNVRD NGPGIAAENL ARVFEPFFTT REVGQGLGLG LSISYAVVER
HGGTLFAESQ LGEWTAFNFD LPRLE
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