| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1284 |
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| Symbol | |
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| ID | 6280992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1440633 |
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| End bp | 1443008 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642620843 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001894923 |
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| Protein GI | 187923281 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0336702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACC TCAACTCTTC CGCGTCTTCG ACAGTCGAAG CCGACTGCGC GAGAGAACCT
ATCCAGATTC CCGGCGGCAT CCAGCCGCAC GGTTTTCTGT TCAGCATTTC GGCCACCGGC
ACGCTGCTGC AAGTCAGCGC CAACACGGCA ACGTTGACCG GCTTACCCGC GGAACACGCG
CTGGGCCAGC CGATCGCGCA AATCGTCGGC GACGAATGGG CAGAACGCAT TGTCAGTACG
CTGGCCACGC ACCAGGAAGA AGGCATTCCG CTTTACGTCG GCTCGATGAA CGATCCGCGC
GCGAACGTCG CCGGTTCACC CGCCGCGCCG TTCGCCGTCA TCGTGCATCG GTATCAGGGC
GTCGTAATCG TCGAACTGGA ACCGGCACGC GGCACGCTCG ACGTGTTCTC GTCCATGTAC
CCGCTGGTGC GCACGTTCAT CAACCGTCTG GAAGACGTGC AAACGGTCGC GGGACTCGCG
CAACTCGCCG CCGACGAAGT GCAGCGCATC ACCGGTTACG GCCGCACGCT GGTCTACAGC
TTCGACGGCA CCGGCAGCGG CCACGTGATC GCGGAACATG TCGAGCCGGG TTATGCGTCC
TACGCGGACC AACACTTCCC GGGCTCCGAC ATCCCCGCGC AAGCGCGCGC GCTCTATGTG
CGCAACCGCA TCCGTCTGAT CGCGGACGCC GACTACCGGC CCGCGCCGCT CGTGCCGCCG
CTGCATCCGT CCACCGGCCG GCCGACGGAT CTCACCTACG CGTCGCTGCG CAGCGTCTCG
CCGGTGCACG TGCAATATAT GAAGAACATG GGCACGCTGT CGTCCATGTC GATGTCGATC
GTGGTGCGCG GCAAGCTGTG GGGACTGATT TCCTGCCATC ACGACACCGC GCGCGTCCCG
CCCTTCGAGG TGCGCACCGC GTGCGAACAC ATCGCGCAAG TGCTGTCGCT GCAGATCGAA
GCGAAGGAGG ATCACGCGGA AGCCGAGTAC CGGCTCGAAC TGCGCCGCGC GCTCGCGCGC
CTGCTCGCGG TCATGGCCAA TACGGACAGT TTCACGGACG CGCTTGCCGG CGATCCGCAA
GATCTGCTCG GACTGACCGC GTCGGACGGC GCGGCGATCG TCTTCGACGG GCGTGTGCTG
CTGGTCGGCA CCACGCCTTC CGAGCCGGAA GTGTCGAAGC TCGTCGAATG GCTCGACACG
CAAGTAGACG ACACCTTCGC CACAGACACG CTCGCTACCG CATACCCGGC GTTGCCGGTT
AATCCTGACT TTGCGGGCGT GCTCGCGGTA TCGATTTCCA AGCTGTTTCG CAACTACGTG
CTGTGGTTTC GCAAGGAAGT CGTTCAGACG ATCAAATGGG CGGGCGATCC GCGCGTGAAA
CTGGCCAGCC TGTCCGCTTC CCTCTCGCCG CGCGAGAGCT TTGCTGTCTG GACCGATACC
GTACGCGGCC GCTCGCCGGC CTGGCGTCCC GCCGAACTCG AAATCGCGGT CGAGTTCCGT
ACCGCGCTGC TGGGCATCGT GCTGCGCCGC GCCGAGGAAC TCGCCCAACT GGCGCTCGAA
CTCGGGCGCG CCAACAAGGA ACTCGAAGGT TTCTCGTACA CGGTATCGCA CGACCTGCGC
GCGCCGCTGC GGCACATCGT CGGTTTCGGC GACCTGCTGC GCCAGATGGA AAGCGAGCGC
CTGTCGGCGC GCGGCAATCA TTTCGTCGAG CGAATCATTT CCTCGGCGCG CTTCGGCGGC
AAACTCGTCG ACGATCTGCT CGCCTTTTCG CAGATGGGGC GCGCGGCCTT GCGTCCGCAA
TCGGTCGATG TGAACGCCAT GACCGAAGCG CTCATCGCGG ACGAAGTCAA GGACGCGCCC
TCGCGCGACA TTGCATGGCG CGTTGGCGCG CTCGGCCATG TGACCGCCGA CGCCGTGCTG
CTGCATGTCG TGCTCCGGAA CCTGATCGAG AACGCGGTAA AATTCACGTC GACCCGCGAG
CGCGCTGAAA TCGAAATCGG CCGCTATGCG GGTGACGGCG AACTGGCCGG GCAGGATGTC
TTTTTTGTCA AAGACAACGG CGTCGGCTTC GACATGCGCT ACGTCGATAA ACTCTTCGGC
GTGTTCCAGC GGCTGCATCG GGTCGAGGAA TTCGCCGGTA CGGGAATCGG GCTTGCTGGC
GTCAAAAGAA TTGTGGAGCG GCACGGCGGT AAAGCCTGGG CGGCGGCCGA AATCGACAAG
GGCGCAGCGA TCTATTTTTC GCTTCCCCAC GTATTCGCCG CCGCCCCGGC TGCGGGAGAA
AAATCTCCCG CGGCGGCCAT GGCGCGACTA ACCGCGTTGG CGCCGGGCAA GCGCTTTCGC
CCCGTGCCGA AGGAGTCGAA AGATGAATCA AAATGA
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| Protein sequence | MADLNSSASS TVEADCAREP IQIPGGIQPH GFLFSISATG TLLQVSANTA TLTGLPAEHA
LGQPIAQIVG DEWAERIVST LATHQEEGIP LYVGSMNDPR ANVAGSPAAP FAVIVHRYQG
VVIVELEPAR GTLDVFSSMY PLVRTFINRL EDVQTVAGLA QLAADEVQRI TGYGRTLVYS
FDGTGSGHVI AEHVEPGYAS YADQHFPGSD IPAQARALYV RNRIRLIADA DYRPAPLVPP
LHPSTGRPTD LTYASLRSVS PVHVQYMKNM GTLSSMSMSI VVRGKLWGLI SCHHDTARVP
PFEVRTACEH IAQVLSLQIE AKEDHAEAEY RLELRRALAR LLAVMANTDS FTDALAGDPQ
DLLGLTASDG AAIVFDGRVL LVGTTPSEPE VSKLVEWLDT QVDDTFATDT LATAYPALPV
NPDFAGVLAV SISKLFRNYV LWFRKEVVQT IKWAGDPRVK LASLSASLSP RESFAVWTDT
VRGRSPAWRP AELEIAVEFR TALLGIVLRR AEELAQLALE LGRANKELEG FSYTVSHDLR
APLRHIVGFG DLLRQMESER LSARGNHFVE RIISSARFGG KLVDDLLAFS QMGRAALRPQ
SVDVNAMTEA LIADEVKDAP SRDIAWRVGA LGHVTADAVL LHVVLRNLIE NAVKFTSTRE
RAEIEIGRYA GDGELAGQDV FFVKDNGVGF DMRYVDKLFG VFQRLHRVEE FAGTGIGLAG
VKRIVERHGG KAWAAAEIDK GAAIYFSLPH VFAAAPAAGE KSPAAAMARL TALAPGKRFR
PVPKESKDES K
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