Gene Bphyt_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1270 
Symbol 
ID6281219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1427608 
End bp1428132 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content62% 
IMG OID642620829 
ProductSpore coat U domain protein 
Protein accessionYP_001894909 
Protein GI187923267 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.248061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0373463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAA AATTGCTGTC ATCCAGCTTG ATCGTCGCCT TGATGTTCGG CTTGCCTTTG 
CAGCTCGCGC ACGCCGCGGT TTATTCGAAC GGCACCGCAG TCACCACCTT TACCGTCACG
CTCACGCTCA ACGCCAATTG CTCGATCAGC GCCAACCCGC TGAACTTCGG CACGAACGGC
GTGCTCGCCA CCGCCATCAA CCAGCAGACC ACGGTTGCCG TGACCTGCAC CAACACCACG
CCGTACAACG TCGGGCTCGA CGCCGGCACC GTCACCGGCT CAACCGTGAC CAATCGCCTG
ATGGCCGGCA CCGCCACCGG CAACACGTCC ACTACCGTCG GCTTCCAGCT GTATCAGGAC
GCCGGCCACA CCACGGCGTG GGGCAACACC CAAGGTACGA ATACCGTCAG CGGCACCGGC
ACCGGGTCGG CGCAATCGAT TGTGGTGTAC GGTCAGGTGC CCGCGCAGAC CACGCCGAAA
CCTGACACCT ACCAGACCAC CATCACCGCC ACGGTCTACT TTTGA
 
Protein sequence
MKQKLLSSSL IVALMFGLPL QLAHAAVYSN GTAVTTFTVT LTLNANCSIS ANPLNFGTNG 
VLATAINQQT TVAVTCTNTT PYNVGLDAGT VTGSTVTNRL MAGTATGNTS TTVGFQLYQD
AGHTTAWGNT QGTNTVSGTG TGSAQSIVVY GQVPAQTTPK PDTYQTTITA TVYF