| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1269 |
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| Symbol | |
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| ID | 6281839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1426859 |
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| End bp | 1427590 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642620828 |
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| Product | P pilus assembly protein chaperone PapD-like protein |
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| Protein accession | YP_001894908 |
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| Protein GI | 187923266 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0558339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0398715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC CTCGCCGGCT CCTGGCGGCA TGCGCCTGCG CGTGGTGTCT GAGTCCGACA
TTCGCGCACG CGGCCACGCT GCAGATTTCG CCCGTCATGG TCGACATGGC GGCCGAAGCC
AACGCCACCG GCATCACGCT GAAAAACCCC GGCGAGAAGC CGCTGTTCGG TCAGGTGCGC
GTGTTCCGCT GGGATCAGGC TAACGGCGAC GACACCCTCA CGCCGACCCA GGACCTCGTC
GCCAGCCCGC CGCTGATCCA GATCGCCGGC CATGCCGACC AGTTGGTGCG GCTGGTGCGC
ACCGCGCCAG CGCCATCCGC ATCCGAGCAG GGTTATCGCG TGCTGATCGA CGAGTTGCCG
GAAGCCGACG CCGCGCCGAC CAGCGGCGTG ACGATCCGCC TTCGCTACTC GGTGCCGGTG
TTCGTCGAAC CGGCCGTCGA CGTCGGCCAG CCCAGGCTGT CGTGGCATCT ATCGCGCGGC
ACCGGCGAGC AAGCCTGGAT GCTGCGCGTC GACAACACGG GCCGTAGGCG CGCGCAAATC
GCCGCCGTGC AATTGATCGA CAACGCCGGC AACGCCTACC CGATCAACAA GGGACTGCTC
GGCTATGCGC TTGCCGGGCG TCAACGGCAC TGGCCGATCA CGCTCCCCGA CAACGTCGCG
CAGAACGGTC CGCTGAAGGT GCGCGCCGCT GTCAACTCTT TGCCGGCTGA AGCCAGCGTG
ACTGTCGAGT AA
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| Protein sequence | MSAPRRLLAA CACAWCLSPT FAHAATLQIS PVMVDMAAEA NATGITLKNP GEKPLFGQVR
VFRWDQANGD DTLTPTQDLV ASPPLIQIAG HADQLVRLVR TAPAPSASEQ GYRVLIDELP
EADAAPTSGV TIRLRYSVPV FVEPAVDVGQ PRLSWHLSRG TGEQAWMLRV DNTGRRRAQI
AAVQLIDNAG NAYPINKGLL GYALAGRQRH WPITLPDNVA QNGPLKVRAA VNSLPAEASV
TVE
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