| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1257 |
|---|
| Symbol | |
|---|
| ID | 6282304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1412911 |
|---|
| End bp | 1414038 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642620816 |
|---|
| Product | glycosyl transferase family 9 |
|---|
| Protein accession | YP_001894896 |
|---|
| Protein GI | 187923254 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.492606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.595723 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGGC TTGCCGGGCG TCTTCGTATT TTTGCGCGGG CCATCCCGCG ACTGCTGATC
AAGCCATTGC GCCGCGAGCC ACGCCACCCG CGCCGTATCC TGATTGCGCA TCATCTATTG
CTGGGCGACA CGCTGCTGCT CACGCCGTTG CTCGCCAAGC TGCGCGAGCA ATACCCCCAG
GCGCAGATCG TTCTCACCTG TCCGAAGGCG ATCGTGCCGT TGTATGCCGG CCGGCCTTTC
GACGTCACGG CCTTGCCGTT CGATCCGCGC GATTCGAAGT CCGTGCGCAA CGTTTTGCTT
TCCGGACCTT ACGACATCGG CATGGTGCTC GGCGACAACC GTCACAGTTG GCTCGCATTG
GGCGCGGGCT GCCGCTGGAT CATCGGGCAC GCGGGCGACC GCCCGGCCTG GAAAAACTGG
CCGCTCAACC GCAGCCTGCC GTATCCCGAC ACGGCGGCGG CCTGGGCCGA CCTCGCCACG
GAACTGATCG ACGGGCCGCC GCCGCGCGCT TATCGCCCGG CCGACTGGAG GGCGCCGCAG
CACGCGGCGC TGCCCGAGCC CTCGCTGCTG ACAAAGCCAT ACGTCGTGCT GCATCCGGGC
GCGAGCACGA GCGTCAAACG CTGGCCCAAC GCGCGCTGGC GCGAGCTTGC GCAACGCGTC
GAAGCACTCG GCTATCTGCC GGTATGGACC GGCGGACCGG GCGAAGCGGA ACTGATTCGC
GCGATCGACC CGGAACCGCA TCATCCGAAT CTGGCGGCGC GGCTCGGCCT CGGCGAGTTA
TGGCATCTGT TTGCCGGCGC GCAAGCCGTG GTTTGTCCCG ATACCGGCGT CGCGCATCTG
GGGCGTCTGA TTGGGGTGCC CACCCTCGCG CTGTTCGGGC CGGGTAACGC GGCGATTCAC
GGCGCGGGCC GCTATTGGCG CGAGGTGCCC TTCGTGCCGA TTACGATCGC CGATATGCCG
TGCCGCGATC AGCCTTTTAT TTTCCGGCGG GAGGTAGCAT GGGTGCGACG CTGTGATCGC
AACGAGACGA CCTGCGTCGC GTGGCGCGGC GACCATGCCG ACTGTATGGG CCGGCTGTCG
GTCGAGTCGG TATACAACGC ATTGCAAAAT GTTCTGGTGA AAGTGTAA
|
|---|
| Protein sequence | MSRLAGRLRI FARAIPRLLI KPLRREPRHP RRILIAHHLL LGDTLLLTPL LAKLREQYPQ
AQIVLTCPKA IVPLYAGRPF DVTALPFDPR DSKSVRNVLL SGPYDIGMVL GDNRHSWLAL
GAGCRWIIGH AGDRPAWKNW PLNRSLPYPD TAAAWADLAT ELIDGPPPRA YRPADWRAPQ
HAALPEPSLL TKPYVVLHPG ASTSVKRWPN ARWRELAQRV EALGYLPVWT GGPGEAELIR
AIDPEPHHPN LAARLGLGEL WHLFAGAQAV VCPDTGVAHL GRLIGVPTLA LFGPGNAAIH
GAGRYWREVP FVPITIADMP CRDQPFIFRR EVAWVRRCDR NETTCVAWRG DHADCMGRLS
VESVYNALQN VLVKV
|
|---|
| |