| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1250 |
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| Symbol | |
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| ID | 6281926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1401205 |
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| End bp | 1402674 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642620809 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_001894889 |
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| Protein GI | 187923247 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA CAGCCGTCAC GCCCAGTACT GCGACTTTTG ATCAATTCGG CCTCGCGCCC
GACATCCTGA AAGCCGTCAA AGAGTCGGGC TACACCATCC CCACGCCGAT CCAGGAGCAG
GCGATCCCTG TCGTGCTGGC CGGCCGTGAC ATGATGGGCG CCGCGCAAAC CGGCACCGGC
AAGACTGCCA GCTTCTCCCT GCCGATCATC CAGCGTTTGC TGCCGCAGGC CAGCACGAGC
GCTTCGCCCG CCCGCCATCC GGTGCGCGCG CTGATCCTCA CGCCGACCCG CGAACTGGCC
GACCAGGTCG CCGCGAACGT GCAGGCGTAT GCGAAACACA CCGCGTTGCG CAGCGCGGTG
GTGTTCGGGG GTGTGGATAT GAATCCGCAA TCCGAGCAAC TGCGCCGCGG CGTCGAGATT
CTGATCGCCA CGCCAGGCCG TCTGCTCGAT CACGTGCAAC AGAAAACGGC CAACCTCGGC
CAGGTGCAGA TTCTCGTGCT CGACGAAGCC GACCGGATGC TCGACATGGG CTTCCTGCCG
GATCTGCAGC GCATTCTGAA CCTGCTACCG AAAGAGCGTC AGACGCTGCT GTTTTCGGCC
ACGTTCTCGG GCGAAATCAA GAAGCTGGCC GCCACGTACC TGCGCAACCC GCAGACCATC
GAAGTCGCGC GCAGCAACTC GACCGCGACC AACGTGACGC AAGTCGTCTA CGAAGTCGCC
GAGGGCGACA AGACCGGCGC CGTCGTGCAA TTGATTCGCG AACGCGGCCT CAAGCAGGTG
ATCGTGTTCT GCAATAGCAA GATCGGCGCG AGCCGTTTGG CGCGCAGCCT CGAGCGCGAC
GGTGTGGTCG CGACCGCGAT TCACGGCGAC CGCACGCAGA ATGAGCGGAT GCAGGCGCTC
GACGCGTTCA AGCGCGGTGA GATCGAAGCG CTGGTGGCGA CGGACGTCGC CGCGCGCGGC
CTGGACATCG CCGAACTGCC GGCGGTGATC AACTTCGACC TGCCGTTCAA CGCGGAAGAC
TACGTGCACC GGATCGGCCG CACCGGCCGC GCGGGCGCTT CGGGCGATGC GTTGTCGCTG
TGCAGCCCGA ACGAGCGCAA GCAGCTGGCC GACATCGAGA AGCTGATCAA GCGTCCGCTG
GATGTGCAGC GCCTGACGGT GGAGGCGCCG GTGCGGCATC ATCATGAAGA ACGCGCGCCG
CGTCGCGAGC GCAGCAGCGA GGGCCGTGAG GATCGTGGCA GCCGTCGTCG CACAGGGGCG
TCGTCGGGTT CGTACGACCG GCCGCATCAT CATCGCGCGC AGCCCGTGGA TGATTTCTTC
CTGAAGCCTT ATGAGCCGTC GCCTTCTTCG GTTCGCAAGA TCGAGGAAGC TGCTGCTGCG
GCCGCGCCGC AAAAGCCGGC GTCCAAGCAA CCGCTGGCAG CGCTGCTGGG CGGGTTTGGG
ATGCCGCGGA AGTCGTCCTC GTCTACCTGA
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| Protein sequence | MSDTAVTPST ATFDQFGLAP DILKAVKESG YTIPTPIQEQ AIPVVLAGRD MMGAAQTGTG
KTASFSLPII QRLLPQASTS ASPARHPVRA LILTPTRELA DQVAANVQAY AKHTALRSAV
VFGGVDMNPQ SEQLRRGVEI LIATPGRLLD HVQQKTANLG QVQILVLDEA DRMLDMGFLP
DLQRILNLLP KERQTLLFSA TFSGEIKKLA ATYLRNPQTI EVARSNSTAT NVTQVVYEVA
EGDKTGAVVQ LIRERGLKQV IVFCNSKIGA SRLARSLERD GVVATAIHGD RTQNERMQAL
DAFKRGEIEA LVATDVAARG LDIAELPAVI NFDLPFNAED YVHRIGRTGR AGASGDALSL
CSPNERKQLA DIEKLIKRPL DVQRLTVEAP VRHHHEERAP RRERSSEGRE DRGSRRRTGA
SSGSYDRPHH HRAQPVDDFF LKPYEPSPSS VRKIEEAAAA AAPQKPASKQ PLAALLGGFG
MPRKSSSST
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