Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1237 |
Symbol | |
ID | 6282662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1383222 |
End bp | 1383854 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642620796 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001894876 |
Protein GI | 187923234 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.665439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAGC CGAAAATCAA AAGAGATCCT GAAGGCACAC GGCGCCGCAT TCTGCTCGCG GCGGCCGAAG AGTTTGCAAA TGGTGGGCTA TTCGGCGCGC GCGTCGATCA GATCGCTCGC CGCGCGGAAA CGAATGAGCG CATGCTCTAT TACTACTTCG GTAGCAAGGA GCAACTTTTC ACCGCGGTAC TCGAGCACGC GTTCAGCGCG CTCAACGAAG CGGAGCGCAC GCTCGAACTC AATGGCATTG CCCCGGTCGA GGCCATCACG CGTCTCGCGC ATTTTGTTTG GGATTACTAC CGCGATCACC CCGAGCTGCT GCGTCTCATC AATAACGAGA ATCTGCACGA AGCACGCTAT ATGCAGAAGT CCACGCGCAT CCGCGAAATG ATCTCGCCGA TCGTCGCCAC GCTCGGCGGC ATTCTCGAGC GCGGTCAACG CGCGGGGCTG TTTCGCACCA ATGTCGATCC GCTGCGCTTC TATGTCACCC TGTCCGGCAT GGGCTATTAC ATCGTGTCGA ACCGCTTTAC GCTCGAAGCC ACCCTCGGCC GCGATTTCAG CAGCGCGAGC GAGCGCAGTG AAGTGATTCA GATGAACACC GAGTTGCTGC TCGCCTATCT GTTGCGAAAG TAA
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Protein sequence | MNQPKIKRDP EGTRRRILLA AAEEFANGGL FGARVDQIAR RAETNERMLY YYFGSKEQLF TAVLEHAFSA LNEAERTLEL NGIAPVEAIT RLAHFVWDYY RDHPELLRLI NNENLHEARY MQKSTRIREM ISPIVATLGG ILERGQRAGL FRTNVDPLRF YVTLSGMGYY IVSNRFTLEA TLGRDFSSAS ERSEVIQMNT ELLLAYLLRK
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