Gene Bphyt_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1233 
Symbol 
ID6283626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1380385 
End bp1380768 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content59% 
IMG OID642620792 
Productcytochrome c class I 
Protein accessionYP_001894872 
Protein GI187923230 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.911336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.743154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC CCCAACAGCC ACTCCACACG GTGTTCAAGG CTGCATGCGC GTCGGCGGCA 
GTGATCGGTC TGGTTGCAGC GAACCTCGCG CACGCGGCCG ACGCCGGCAA CGGCAAGGTG
CTGTCCGAAA GCCACAACTG CGCGGCATGC CACGGCGTGA ACCTGAACAA GCCGGTGAGC
CCGGAGTATC CGAAGCTCGC GGGTCAGCAT TCGGATTACG TCTACTTTGC GCTGCGTCAG
TATCAGATGG GCAACGGCAA CCCGCATTTC GGCCGCAATA ACGCGATCAT GCAGGCGCAG
GTGCAAAGCC TGTCGCAGAG CGATATGAAA GACATCGCCG CTTATATCGA ATCGCTGAAC
GGCGATCTGG TGCAGAAGAA GTAA
 
Protein sequence
MNKPQQPLHT VFKAACASAA VIGLVAANLA HAADAGNGKV LSESHNCAAC HGVNLNKPVS 
PEYPKLAGQH SDYVYFALRQ YQMGNGNPHF GRNNAIMQAQ VQSLSQSDMK DIAAYIESLN
GDLVQKK