Gene Bphyt_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1220 
Symbol 
ID6284616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1367260 
End bp1367766 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content62% 
IMG OID642620779 
ProductOmpA/MotB domain protein 
Protein accessionYP_001894859 
Protein GI187923217 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.936608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAACA TTCTGAGCAC AACCGCATGC GCGATCTCTA TCCTGCTGGT GACAGGTTGC 
GCAGCGCAAC TGAACCGCGA CACGGAGACA TCGCTGAACA AGGCTGTCGG TATCGAGGTG
GCGCCGGTCG CCGGCGGTGT CGCGGTCAAG CTGCCCGAAA CCGCCCTGTT CGATTTCAAC
AAATCCGAGG TGCGCAGCGA CGCGGCGGCG GTCATCGATC GTTCGGCCGT GCTGCTCAAG
CGCAGCAAGA AACCGATTGT CGTCGAGGGC TACACCGACA ATGTCGGCAC GCTCGAATAC
AACCAGCATT TGTCCGAGGC GCGCGCGAGC GCGGCGGGTT ACGCGCTCGT GGCGCGCGGC
ATCGCCATGG ACCGTATTCG CACCAAGGGC AATGCGTACA ACAATCCGGT GGCAAGCAAC
GATACACCCG AAGGCCGCGC GCTGAACCGT CGCACCGAGA TCGTCGTGCG CGGCGAGACG
ATGGATACGT TGATGGGCAA GAAGTAA
 
Protein sequence
MRNILSTTAC AISILLVTGC AAQLNRDTET SLNKAVGIEV APVAGGVAVK LPETALFDFN 
KSEVRSDAAA VIDRSAVLLK RSKKPIVVEG YTDNVGTLEY NQHLSEARAS AAGYALVARG
IAMDRIRTKG NAYNNPVASN DTPEGRALNR RTEIVVRGET MDTLMGKK