| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1216 |
|---|
| Symbol | |
|---|
| ID | 6284612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1360926 |
|---|
| End bp | 1362824 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642620775 |
|---|
| Product | heat shock protein 90 |
|---|
| Protein accession | YP_001894855 |
|---|
| Protein GI | 187923213 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0326] Molecular chaperone, HSP90 family |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAG AAACCATGAG CTTTCAGGCA GAAGTGAAAC AGCTTCTGCA CCTGATGATT
CATTCGCTGT ACAGCAACAA GGAAATTTTC CTGCGCGAGC TGATTTCGAA CGCCTCCGAC
GCGGCCGACA AGCTGCGCTT CGAAGCGATC GAAAACAGTG CGCTGTACGA AAACGATCCG
AACCTGCGGA TTCGCGTGTC GTACGACAAG GCCGCGCGCA CCATCACGCT CGACGACAAC
GGCATCGGCA TGAGCCGCGA CGAAGCGATC GCCAACCTCG GCACGATCGC GCGCTCGGGC
ACCAAGGAAT TCTTCGGCAA GCTCTCCGGC GACCAGCAGA AAGATGCGGC GCTGATCGGC
CAGTTCGGCG TGGGCTTTTA TTCGGGCTTC ATCGTCGCGG ACAAGATCAC GGTCGAGACG
CGCCGCGCCG GCTTGCCGGC TTCGGAAGGC GTGCGCTGGG AAAGCGCGGG CGAAGGCGAT
TTCGCCGTCG AGCAGATCGA GCGCGCCGCG CGCGGCACGA CCATCACGCT GCATCTGCGT
GCTGATGAAG ATGAGCTGCT GTCGTCGCAC CGTCTGAAGT CGATTATCCA GAAGTACTCC
GATCACGTCG CGCTGCCCAT CTTGATGCAG AAGGAAGAGT GGGACGCGGA AAAGAGCGAG
ATGGTCACGA AGGACGAGGA CGAGACCGTC AATCAGGCCA GCGCGCTGTG GACGCGCTCG
AAGAACGAGA TCACCGACGA GCAGTACAAG CAGTTCTATC AGCACCTCTC GCACGACCAT
CAGGATCCGC TCACGTGGAC GCATAACCGT GTGGAAGGCC GCAGCGAGTA CACGCAGTTG
CTGTACGTGC CGACCCACGC GCCGTTCGAC ATGTTCAATC GCGATTATCG CGGCGGCCTG
AAGCTGTATG TGAAGCGAGT GTTCATCATG GACGACGCCG AGCAACTGCT GCCTGCGTAT
CTGCGCTTCG TGAAGGGCGT GGTCGATTCG GCGGATTTGC CGCTGAACGT GTCGCGCGAA
ATTCTGCAGG AAAGCCGCGA TGTCAAGGCG ATCCGCGAAG GCGTGACCAA GCGTTCGCTG
TCCATGCTCG AAGAGCTGGC CAACTCGGAT AACGAAGCCG ACAAGGAAAA GTACGCCGGT
TTCTGGAAGG AATTCGGCCA GGTGCTGAAG GAAGGCATCG GCGAAGACTT TGCCAACCGC
GAGCGGATCG CGAAGCTCGT GCGTTTTGCG TCGACGCATA CGGAGACAGC CGAGCAGACC
GTGTCGCTGG CCGACTACGT CGCGCGCATG AAGCCCGAGC AGACCAAGAT CTACTACGTG
ACCGCCGACA CCTGGCAGGC GGCGACCCAC AGCCCGCACC TCGAAGTGTT CCGCAAGAAG
GGCGTGGAAG TGCTGCTGCT GACCGATCGC GTGGATGAGT GGATCCTGTC GTTCCTGAAC
GAATTCGAAG GCAAGCCGCT GCAAAGCGTG GCGCGCGGCG ATCTCGATCT GGGCGCGTTG
AACGACGAAG AAAAACAGGC GCAAGAGAAG GTCGGCGAAG AGTTCAAGCC GCTCGTCGAG
AAAATGAAGG AAGCGCTGAA GGACAAGGCC AAGGACGTGC GTCTCACGTT CCGCCTGACC
GATTCGCCGT CCTGCCTCGT TGCCGACGAC GGCGAAATGA GCGGCTATCT GCAGCGCATG
CTCAAGGCCG CGGGCCAGAC GGCGCCGGCG TTCCATCCGA TTCTCGAAGT GAATCCGGAG
CACGCGCTGG TGAAGGGCCT GCACGCGGAC AGCGCGAACT TCGACGACTG GTGCCACCTG
CTGTTCGATC AGGCATTGCT CGCCGAAGGT GGCGCGCTGG ACGATCCGGC GAGCTTCGTG
AAGCGCACCA ATGCGCTGCT GCTTGCGCGC GCGAACTGA
|
|---|
| Protein sequence | MAQETMSFQA EVKQLLHLMI HSLYSNKEIF LRELISNASD AADKLRFEAI ENSALYENDP
NLRIRVSYDK AARTITLDDN GIGMSRDEAI ANLGTIARSG TKEFFGKLSG DQQKDAALIG
QFGVGFYSGF IVADKITVET RRAGLPASEG VRWESAGEGD FAVEQIERAA RGTTITLHLR
ADEDELLSSH RLKSIIQKYS DHVALPILMQ KEEWDAEKSE MVTKDEDETV NQASALWTRS
KNEITDEQYK QFYQHLSHDH QDPLTWTHNR VEGRSEYTQL LYVPTHAPFD MFNRDYRGGL
KLYVKRVFIM DDAEQLLPAY LRFVKGVVDS ADLPLNVSRE ILQESRDVKA IREGVTKRSL
SMLEELANSD NEADKEKYAG FWKEFGQVLK EGIGEDFANR ERIAKLVRFA STHTETAEQT
VSLADYVARM KPEQTKIYYV TADTWQAATH SPHLEVFRKK GVEVLLLTDR VDEWILSFLN
EFEGKPLQSV ARGDLDLGAL NDEEKQAQEK VGEEFKPLVE KMKEALKDKA KDVRLTFRLT
DSPSCLVADD GEMSGYLQRM LKAAGQTAPA FHPILEVNPE HALVKGLHAD SANFDDWCHL
LFDQALLAEG GALDDPASFV KRTNALLLAR AN
|
|---|
| |