| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1215 |
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| Symbol | |
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| ID | 6284611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1359294 |
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| End bp | 1360754 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642620774 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001894854 |
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| Protein GI | 187923212 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTCC CGCTTACCCA GATTCCCACT CCGCACGACA CCACGTCGCT GACGCTGGTC
GAGCAGCTCG TCCAGTGGGC GCGCCGCCGC ATCGAGGAGC GCGTGTTCCG CCCCGGCATG
CGCATGCCGT CGATCCGCAA GCTGGCGCTC GACAAGGGCG TGTCGCGCTT CACGGTGGTC
GAGGCGTACG AACGGCTGGT GGCGCAGGGT TTTCTGGAGT CGCGGCGCGG CTCCGGGTTC
TATGTGCGCG AACGGCTGGG CGGCGCGGCC AGTGCTAGCG CCGAGATTCA TCCGCTCACC
GCGGCGGCGC CGGCGCCCGC CACGATCGAC GTGGTTTGGC TGCTCCGCAA CATGCTGCAC
ACCGGCGCGC GCCCCGAGCG CAGTCCCGGG CTGGGTTATC TGCCGGCGCG CTGGCTCGAC
GGCGACCTGA TCACCAACGC GCTGCGCACG CTCGGCCGGC AAAGCGGCGC GCAGATGCTC
GGCATCGGCA CACCGCAGGG TTTTTTGCCG CTGCGCCAGC AATTGCAGAC GCGGCTCGAG
GAACTGGAGA TCGGTGCGTC GCCGGATCAG ATCGTGATGG TGTCCGGCAT TACGCAGGCC
ATCGACCTGA TCTCGCGCAT CTACGTCAAG CCGGGCGATG CGGTGATCGT CGGCGATCCG
GCGTGGTTTC AGATGTTCGG GCGTTTCGCG TCGCAGGGCG CGCGGCTAGT GGGCATGCCG
TACACGCCGG ACGGCCCCGA TCTCGACGCG CTCGAGTCGC TCGTACAGAC GTGGCGCCCG
AAAATGCTGG TCATCAATTC GGTGCTGCAG AACCCGACCG GCACGTCGCT CACGGCGGCG
CAGGCGTTCC GCATTCTGCG CCTCGCCGAA GCGTACGATT TCATCGTCGT CGAGGATGAT
ATTTACGGCG ATCTGTGTCC GCCGAGCTAT CCGGGCACGC GCCTCGCGAG TCTCGACCAG
CTGAAACGCG TGATCTATCT CGGCAGTTTT TCGAAGACGC TCGCGCCGAA TCTGCGCGTG
GGTTTCATTG CCTGCGCGCC CGAAGTGGCG ACGGCGGTCA GCGACCAGAA AATGCTGGTC
GGCATGACGA GCCCGGAACT GAACGAGCGT GTGCTGTACA AGATTCTGAC CGAAGGCCAC
TACAGGCGGC ATGTCGAACG GCTGCGCGTG CGGCTCGACG GCGTGCGCGA GAAGTCCGTG
CGAATGCTGG AGAAGACCGG CCTGAAGCTG TTCCTGACGC CTATGGCCGG CATGTTTTTG
TGGGCCGACA CGGGCGTCGA CGCCGACGCG CTGGCGGCCG CCGGCCACGA AGCCGGCTTT
CTGCTGACGC CCGGCAGCCT GTTTTCCCCG CAGCAGTCGT CGACCACCTG GATGCGCTTC
AATATTTCCA ATTGCGGCGA TCCGGAACTG GCCACCTTTT TGTGCCGGTA TCTCGACAGC
GTGGCGCGCC GCGCCTCTTG A
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| Protein sequence | MSVPLTQIPT PHDTTSLTLV EQLVQWARRR IEERVFRPGM RMPSIRKLAL DKGVSRFTVV
EAYERLVAQG FLESRRGSGF YVRERLGGAA SASAEIHPLT AAAPAPATID VVWLLRNMLH
TGARPERSPG LGYLPARWLD GDLITNALRT LGRQSGAQML GIGTPQGFLP LRQQLQTRLE
ELEIGASPDQ IVMVSGITQA IDLISRIYVK PGDAVIVGDP AWFQMFGRFA SQGARLVGMP
YTPDGPDLDA LESLVQTWRP KMLVINSVLQ NPTGTSLTAA QAFRILRLAE AYDFIVVEDD
IYGDLCPPSY PGTRLASLDQ LKRVIYLGSF SKTLAPNLRV GFIACAPEVA TAVSDQKMLV
GMTSPELNER VLYKILTEGH YRRHVERLRV RLDGVREKSV RMLEKTGLKL FLTPMAGMFL
WADTGVDADA LAAAGHEAGF LLTPGSLFSP QQSSTTWMRF NISNCGDPEL ATFLCRYLDS
VARRAS
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