Gene Bphyt_1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1207 
Symbol 
ID6281403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1350628 
End bp1351086 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content63% 
IMG OID642620766 
Producthypothetical protein 
Protein accessionYP_001894846 
Protein GI187923204 
COG category[S] Function unknown 
COG ID[COG5615] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.760838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGG CTATCGAACT CGCGCTCTTT CTCCATTTGC TCGCGGTTGC TGTGTGGGTA 
GGTGGGATGG TGTTCGCGCA TTTCTGTCTG CGCCCGGCCA TTGCCGATCT CTCGCCGCAA
TTACGCTTGC CGTTGTGGGA ATCGGTGTTC GGCCGTTTCT TCAACTGGGT CGCGGCCTCG
GTGCTGGTGA TTCTCCTCAC CGGCGGCTTC CTGCTGATGC AATTCGGCGG CGGTCATGCC
ACCTGGCCGC TGCATGCCAT GGCCGGCCTC GGCATCGTGA TGATGCTGAT CTTCGGGCAT
ATCCGCTTTG CCGTATTCCC GCGCATCCGC CGCGCGGTGC AGGCGCAAAA ATGGCCGGAT
GGCGCGCGCG CCGTCGGCAC GATCCGACGT CTGGTGCTGA TCAATATCGT GCTCGGCGTG
GTGACGATCG GCGTCGCGGT GCTGTCGCGC GGTTTCTGA
 
Protein sequence
MNKAIELALF LHLLAVAVWV GGMVFAHFCL RPAIADLSPQ LRLPLWESVF GRFFNWVAAS 
VLVILLTGGF LLMQFGGGHA TWPLHAMAGL GIVMMLIFGH IRFAVFPRIR RAVQAQKWPD
GARAVGTIRR LVLINIVLGV VTIGVAVLSR GF