| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1172 |
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| Symbol | |
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| ID | 6284370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1311525 |
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| End bp | 1312994 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620732 |
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| Product | phage portal protein, lambda family |
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| Protein accession | YP_001894812 |
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| Protein GI | 187923170 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5511] Bacteriophage capsid protein |
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| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.751074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAA ACTTTATCGA CAGGGCCATT GAATACGTGG CGCCGGGGAT CGCCGCGCGA
CGCATGCGTG CGCGGGTGTC GATCCACGCC GCGCGCGGTT TCGACGGCGC GAAGCGCGGG
CCGCGCTCGG CGGGGTGGCG TGCCTCGGGC GCCAGCTCGA CAGCAGAGGT ACTGCCCGCG
CTCGGCGTCC TGCGCAACCG CGCGCGTGAT CTGGTGCGCA ACAATCCGCA CATTCGTCGC
GCGCTCAAGA TCCTGGTGGC CAATGCGATC GGCACGGGCG TGCAGGCCAA GTTCACCGAC
AAGGCCCTGC AGAAGCTCTG GAAACGCTGG GTGAAGGTCT GCGATGCCGG CGGACTACTG
GATTTCTACG GCCTGCAGGC GCAGGCATAC AAGGCCCTGA AGGAGTCGGG CGAAGTGCTG
CTCAGGTTTC GCACGCGCCT GCCGCAGGAC GGCATGGAGG TGCCGCTCCA GTTGCAGATC
CTGGAGATCG ATTTTCTCGA TACGCTGAAG GTCGGTGCGG TCGACGGCGG GTTCATTGTG
GCCGGCGTGC AGTTCAACAT GATCGGCCAG CGCACAGGCT ACTGGCTGTT CGATCAGCAT
CCCGGCGAAG TGGCGCAGGT GCCGCGCAAC ATGCTGAGCC GCTTTGTGCC GGCTTCGGAG
ATCATCCACC TGTTCGATGC AATCGACCGG CCCAACGCGG TGCGCGGATT CCCCTGGCTT
GCGTCTGCGA TCTGGAAAGC CCGTGACCTC GACGAGTATC AGGACGCCGA GCTCGTGCGC
AAAAAGATCG AGGCCTGTTT CGCGGCCTTC GTCACGTCTA GCGACGAAGG CTTTCAGGTG
GGGCGCACCA CGGCATCTGC GCCAGGAGAC TCTCGTCGTG TGGAGTCGCT ATCGCCCGGC
ATGGTCGAGT ATCTGCGGCC GGGCGAAACC GTGGATTTTT CCGCGCCCGC CACCAGCAAT
GACTATGAGG GCAATGTACG CGTCGACCTG CGTGCGATCG CGGCTGGCAC GGACACGACG
TATGAACAGC TGACCGGCGA CTATTCGCAG GTCAATTTCA CCAGCGGTCG CATGGGGAAA
ATGGAGTTCA AGCGATTCCT CGAGCAGGAC CTGTGGCTCA TCTTCATTCC GATGTTTTGT
GAAGCGGTTG CCAGCCGCTT CGTCTCCACG GCCTATCTTG CTGGCAGGAC GAAACAGCCG
TTGGCCGACG TGTCCTGGTC GCCGCAGCGC ATCGAATTTA TCGATCCGTT GCGCGAAGCG
AACGGCATCA TCGCGCTGAT CGACGCCCGT CTGAAGAGCC GGCATCAGAG CATTCGCGAT
CTCGGCGAAG ACCCGGACGA AGTCGATGCC GAAATCAATG CGGATCCGCT GGCAATCGAG
GTGCCCATTT CGGGCCGCTC GCTCGACGCG AAATCGGCGC ACGACGTTCT CGACCGGCTG
GAGCAGATCC TCTCGGCGGT GCCACAGTAG
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| Protein sequence | MKTNFIDRAI EYVAPGIAAR RMRARVSIHA ARGFDGAKRG PRSAGWRASG ASSTAEVLPA
LGVLRNRARD LVRNNPHIRR ALKILVANAI GTGVQAKFTD KALQKLWKRW VKVCDAGGLL
DFYGLQAQAY KALKESGEVL LRFRTRLPQD GMEVPLQLQI LEIDFLDTLK VGAVDGGFIV
AGVQFNMIGQ RTGYWLFDQH PGEVAQVPRN MLSRFVPASE IIHLFDAIDR PNAVRGFPWL
ASAIWKARDL DEYQDAELVR KKIEACFAAF VTSSDEGFQV GRTTASAPGD SRRVESLSPG
MVEYLRPGET VDFSAPATSN DYEGNVRVDL RAIAAGTDTT YEQLTGDYSQ VNFTSGRMGK
MEFKRFLEQD LWLIFIPMFC EAVASRFVST AYLAGRTKQP LADVSWSPQR IEFIDPLREA
NGIIALIDAR LKSRHQSIRD LGEDPDEVDA EINADPLAIE VPISGRSLDA KSAHDVLDRL
EQILSAVPQ
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