Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1166 |
Symbol | |
ID | 6281907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1303788 |
End bp | 1306478 |
Gene Length | 2691 bp |
Protein Length | 896 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642620726 |
Product | virulence-associated E family protein |
Protein accession | YP_001894806 |
Protein GI | 187923164 |
COG category | [R] General function prediction only |
COG ID | [COG5545] Predicted P-loop ATPase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.67711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACGT TAGAGCAGAT TGTTCTGCAG CTCGCGGCGG ACGGTCATCC CACGCTGCCT GACGGCCATC CGATCGCTGA CGGCAAGCCG CATCGATATG GAGCCGGAAA AAAGTATTGG TATTCGCTGC ACCAGATCGA ACGTTCCGGC GAGGTTCTCG GCTACACGGG CGCATTCGGA CGCTGGTCGG GCAATGACAA TGGTGCGCAA CCTTTCCAGT GGCATGGCGA GGCACTTACG CAGGAAGACG TCAACGCGAC ACGCCAGCGT CAGCAAGCGG CAGAACGGGC GGAAGCCGAG AAGAAAGCGC AAGCAGCAAA GCTCGCCGCG AATCGCGCGC GCGATCAGTG GCACAAGGCA AACGACGACG GCGTGTCCGC CTACCTCGAC AGGAAGCAGA TCACGCCTGA AGGTGTGCGC TTCGACGCCG ACGGCACATT GCTTGTTCCG ATGTTCCAGT ACACCGACAC CATCCGACTT GTCGGCCTGC AGAAAATCAC GCCGGATGGC GCGAAGCGCT TTAACAAAGG AATGGAGAAG AAAGGCGCGG CTTACCTGCT CGGTGATATA GGCGACGATG ACAAGGTCGC GATGATCGCG GAGGGCTACG CTACGGCCCG ATCGATCCGG ATGGCTACCA ATGATGCAAT TCCGCTGGTG ATCTGCTTTG ACGCTGGCGG CATTCTTTCG ACTGCGCGTC GTCTGCGCGA ACGCCATCCC GATCTCCATG TGCTGGTGTG CGCCGACGAC GACTGGAAGA TTGAGCAGCG CCTGCGCGAC TGCCTTCTGG AAGACTTTGG CTACAGCGGA GAGCTGGTGC CCGGTGGCGA CGCAGTCCGC GTCGAGACGA GGAACACCTG GTACATGCTG CGCGCCGAGC ACAAACAGAT CAACGGCGGC GTCGAGTTCA TTGAGCTGAC GATCTGGAAT GACGTCATGC CGGAGCGTCG CAGACGCTTC GAGAATGCGG GACTGAAGTA TGCGTACGAA GCGGTCGCGG ACATCGGGCA GGCAAGCGTG GTGTTTCCGC GCTTTGCCGA TCGCGGTGAT CGCAAGCTGA CAGACTTCAA TGATCTGCAT TGCACCGAAG GGCTCGAAAG CGTGCGCCGG CAGATCCAGT CGGCGCTACT CGCCGCGTTG GCGCCAGCAG CAGAAGATGT TCCTCTCACG GCTCTGATGC AGGACCAATA TCTTGCTGCC GACCCTCTGT ATGACCGCGC AGTCGCGGTC GTGCGGGACG CAGCTCGTGC ATCCGTTTCG CTTGTGCAAC GTGCATTGAG TATTGGCTTC AATCGTGCGG CCCGGCTCAT CGAACGCATG GCGGTCGAAG GCATCGTTTC GGACGAGCAT CCGAATGGAA CGCGTACTGT ACTGAGCATC GCGGGAGTGG AGCCCGCGAC GTCCGCTGGC GCTGCGACAG ACGATGCGCC AAATCACGAT GTTGAAAACG GCGCGCACAC GTGGGAGCGC GACCTCGCGC GATCCGAAAA AGGCAATTTG CTGCCCACAC TCGGCAATGT GCATCTCATT TTGTCGAATC ACAAGGCATG GCAGGGCGTC ATTGCGCAGG ATGATTTCGC CGGTCGCGTC ATGAAGCGAA AGCGGCCACC GTTCGCTCAG GGCGAAACCG GGGAGTGGTC CGACATGGAT GACATTCGCT GCGTGCTCTG GTTGTCGCAG AAATACGGCA TCTCCGTGCG ACAGGACATC GTGATGAACG CAGTGCTGCT GGTCGCCGAT GCGACGCACT TTCACGATGT ACGCGAATAC CTCGAGGGCG TTGTCTGGGA TGGTATCGAA CGCGTGCGCA GCTGGCCGAC GCGCTATATG AAAGTGGCGG ACAGCGAATA CGTCCAGCTT GCTGGTATGA AGTGGCTCAT TGCAGCAGTC GCACGCGTGA TGCGTCCGGG CTGCAAGGCC GATAACGTAC TGATTCTCGA AGGCAGGCAG GGCTGGTTCA AGTCGACCGC GCTGGAAGTG ATCGCGGGCA AACCGTGGTA CACGAACTCG CCGATCCGCA TTGGCGACAA GGATACGTAC GCTGTCATGG CGGGCAAGTG GATCATCGAG CTGGCGGAGC TTGACTCGCT CAACAAAAGC GATTCGTCGG CCGCCAAAAG CTTCTTCGCG ACCGAAACGG ACCGGTTCCG CAACTTCTAT GGCAAGCGTG CAACGGACGT GCACCGGCAG GGTGTGTTCG CCGGTTCGGT CAACTTCGAC ACGTACCTCA AGGATGAATC GGGCAATCGC CGTTACTGGC CGCTGCGTGT CGGCGGACCG ATTCTGATTG ACGATCTTCG CCGGGACCGC GACCAGCTGT GGGCCGAGGC GGTGCATCTC TACCGGCAAG GCGTCATCTG GCACGTAACG GAAGCGGAGA AGCCGCTGTT CGAAAGCGAA CAGGCTGAGC GCTATGAAGG TGACGTGTAC GAGGATCGCA TCGCGCGTGA TCTTGAGCTT CGGGGGCGCG TCACGATGGA AGAGATTCTG GCTGACATCC TGAAGCTCGA CACGTCCAAG TGGACGCCGC CCGAGCAGCG GCGGGTCGGC AAGGCATTGA AGTCACTCGG CTGGGTGCGC AAGCGGGAAT CGACCGGCCG TCGCGAATGG TTTTATGTGA AGGAAGAGGA AGTTCCGCAG CCGGCCACAG AACTCATAAC CGAAGGTGCC GACGATGATG CGCCGCTTTG A
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Protein sequence | MSTLEQIVLQ LAADGHPTLP DGHPIADGKP HRYGAGKKYW YSLHQIERSG EVLGYTGAFG RWSGNDNGAQ PFQWHGEALT QEDVNATRQR QQAAERAEAE KKAQAAKLAA NRARDQWHKA NDDGVSAYLD RKQITPEGVR FDADGTLLVP MFQYTDTIRL VGLQKITPDG AKRFNKGMEK KGAAYLLGDI GDDDKVAMIA EGYATARSIR MATNDAIPLV ICFDAGGILS TARRLRERHP DLHVLVCADD DWKIEQRLRD CLLEDFGYSG ELVPGGDAVR VETRNTWYML RAEHKQINGG VEFIELTIWN DVMPERRRRF ENAGLKYAYE AVADIGQASV VFPRFADRGD RKLTDFNDLH CTEGLESVRR QIQSALLAAL APAAEDVPLT ALMQDQYLAA DPLYDRAVAV VRDAARASVS LVQRALSIGF NRAARLIERM AVEGIVSDEH PNGTRTVLSI AGVEPATSAG AATDDAPNHD VENGAHTWER DLARSEKGNL LPTLGNVHLI LSNHKAWQGV IAQDDFAGRV MKRKRPPFAQ GETGEWSDMD DIRCVLWLSQ KYGISVRQDI VMNAVLLVAD ATHFHDVREY LEGVVWDGIE RVRSWPTRYM KVADSEYVQL AGMKWLIAAV ARVMRPGCKA DNVLILEGRQ GWFKSTALEV IAGKPWYTNS PIRIGDKDTY AVMAGKWIIE LAELDSLNKS DSSAAKSFFA TETDRFRNFY GKRATDVHRQ GVFAGSVNFD TYLKDESGNR RYWPLRVGGP ILIDDLRRDR DQLWAEAVHL YRQGVIWHVT EAEKPLFESE QAERYEGDVY EDRIARDLEL RGRVTMEEIL ADILKLDTSK WTPPEQRRVG KALKSLGWVR KRESTGRREW FYVKEEEVPQ PATELITEGA DDDAPL
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