| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1153 |
|---|
| Symbol | |
|---|
| ID | 6283466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1294874 |
|---|
| End bp | 1296013 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642620713 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001894793 |
|---|
| Protein GI | 187923151 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.361885 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA AACAGCCCCA ACCAGCGAAT GACATAGAGA TCATCGCCGT AAAAGATTTG
CGGCTTGATG CGCTGAACCC TCGCCTGCCG ACGACGGTTG CGCGGACGCA GGAGGCGATG
ATCGATTATT TGGCCACGAC AACCTCGATA GAGGATCTGA TGTCGGCGAT CGCGGAAAAC
GGATATTTTC CGGGTGAGCC GCTGATCGCG GTCAAGCGCG ATAACGAAGA CCTCTACGAC
GTTGTTGAAG GAAATCGTCG CTTAACCGCA GTCATTCTTC TTAACGACCC ATCCCGGTGT
TCAAAGCCTT CGACCCGGAT GAGGGAGTTG TCCGACTCGG TGGGCGACTT CGACGAGTTG
CCGGTGGTTG TGAGGGCGAC GCGGCAGGAA GTGCTGCCCT ACCTGGGTTT TCGACATATC
ACCGGTGTCA AGCAGTGGGA GCCGTTAGCT AAAGCTCGCT ACCTCAAGCA GCTGTTTGAC
ATGACGAACA CCACTGCAGT ACCTGGTGAT CGCTACGCAG AAGTTGCGAA CGCAATTGGC
AGTAGGCGCG ATCACGTTAA GCGCAATCTG GATGCACTTG CCGTCTATGA GGTGATCGAG
CAACAGGATT TTTTTGAGAT CGATGAGCTT GGAGAGGAAT CCATCAAGTT CTCGATCCTT
TCCACGGCCC TCGCAGACGA AAACATTGCG TCTTTTGTCG GCAGTGCGGT TTGGGATGCA
GCAGAACAGG AGTATTTGCC CACTAACCCG ATTGTTGACG CCGACGCTCT TGACGTACAC
AAAGTGCGGA AGCTCGCGGA ATGGTGCTTC AAGAAAGACG AGAAGGGCAA GACGGTCCTC
GGCGAATCTC GAAATCTTCG TCAACTTGCT GCAGTCGTTT CCACAAGCAA GGCGCTTGAG
GCACTGCAGA ATGGCGCATC GCTTGAGTAT TCCTATCGGA TGACGAAGGG TGTCGACGCG
GAGTTCCTCG AATTGCTATA CGAGGCAGAG GCGACTGTGC GTAGGGCGGT GTCAATGATC
GCAAGCGTGG ACTATGCGCC CGAAGCGGTT GACGTTGCCA GAACAATTTT CAAGAATGTA
AGGCTTATTG GTACGCAGCT CGCCGACAAA AAGCCGAAGG ATTCAGAAGA TGAGTTTTAA
|
|---|
| Protein sequence | MAKKQPQPAN DIEIIAVKDL RLDALNPRLP TTVARTQEAM IDYLATTTSI EDLMSAIAEN
GYFPGEPLIA VKRDNEDLYD VVEGNRRLTA VILLNDPSRC SKPSTRMREL SDSVGDFDEL
PVVVRATRQE VLPYLGFRHI TGVKQWEPLA KARYLKQLFD MTNTTAVPGD RYAEVANAIG
SRRDHVKRNL DALAVYEVIE QQDFFEIDEL GEESIKFSIL STALADENIA SFVGSAVWDA
AEQEYLPTNP IVDADALDVH KVRKLAEWCF KKDEKGKTVL GESRNLRQLA AVVSTSKALE
ALQNGASLEY SYRMTKGVDA EFLELLYEAE ATVRRAVSMI ASVDYAPEAV DVARTIFKNV
RLIGTQLADK KPKDSEDEF
|
|---|
| |