Gene Bphyt_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1152 
Symbol 
ID6283465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1293672 
End bp1294769 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content60% 
IMG OID642620712 
Productintegrase family protein 
Protein accessionYP_001894792 
Protein GI187923150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.379304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAA TCCTGCCTGT CGGCAGTCGC TGGCGTGCCC AGGTACGCAA ACGCGGCCAG 
AGTATAGCAA AAACATTCAG GACGAAAGGT GCAGCGCAGG CGTGGGCGCG GGAGAAGGAA
GTCGAAATCG AGAAGGGTAT CCATGCCGTC GAGCTGGCCA CGGTCACTGT CGGCACGTTG
ATCAGAAAGT ACCGCGAGGC CCGTGCCGAA TCGGGCCGCC CGGTCAAGCC GAAATCGAAC
GAGGATTACA TCCTGCAGCG GCTCCAGGAT GAGTTTGAAA GTGACTTTGC CGCGCAGCTC
ACCACGCAGC GCATCGTGCA GTTCGCGCAG AAGCGCAGGA AGTCCGGCGC CGGCGGATTT
ACTATCGACA TGGATATTTC CAAGCTCGGT ACGGTCATGC GGCACACCGG GTCGCTGCTC
GATCTGGCGC TGCCCGATGC GACCGGGATC GCCCGGCCCA CACTGCACCA CCTGAACCTG
ATCGAAGCAG GCAAACGGCG CGAGCGGCGG CCGACGCCCG AAGAGATCGG GAAGATATTT
GCGTGGTTTG CTGAGCATCC AGAGCGCGAG CAGGCGATGC CGGATCTGCT GCGGGTCGCG
ATGCAGTGCG CGTTCCGGCG CGGCGAGTTG TTCAATCTGC AGTGGGACGA CATTGATGCG
GAAAATCATC TCGCGCTCGT GCGTGATCGC AAGCATCCCC GGCAGAAGAT GGGTAACAAT
GAATGGGTCC CGTTAATCGG CGATTCGTTC GAGGTGATCA TGCGGCAGGC GCGTTACCCT
GTGCCGGAGG CGTACGCGGA GAAGCGCAAG GCCGATCCGA CAGTGCCGCC GCACAAGAAC
GAATTCATTT TCCGGTTCGA CAAGGGCACG GCTAGCAAGT ACTTCAAGCG GGCGTGTGAC
GACAAAGGCA TTGTGGATCT GCATTTGCAC GACCTGCGCC ACGAAGCGAC GAGTGCGCTG
TTCGAGGCGG GCTGGCAGAT TCCTGAAGTG GCCGCCGTGA CTGGACACAA GGACTGGCGA
AACCTGAAGC GTTATACGAA TCTAGACCCG GCTCAGGTAG CGAGGAAGGG CAGGCTGAAA
TTAGTAAATG CGGCTTGA
 
Protein sequence
MASILPVGSR WRAQVRKRGQ SIAKTFRTKG AAQAWAREKE VEIEKGIHAV ELATVTVGTL 
IRKYREARAE SGRPVKPKSN EDYILQRLQD EFESDFAAQL TTQRIVQFAQ KRRKSGAGGF
TIDMDISKLG TVMRHTGSLL DLALPDATGI ARPTLHHLNL IEAGKRRERR PTPEEIGKIF
AWFAEHPERE QAMPDLLRVA MQCAFRRGEL FNLQWDDIDA ENHLALVRDR KHPRQKMGNN
EWVPLIGDSF EVIMRQARYP VPEAYAEKRK ADPTVPPHKN EFIFRFDKGT ASKYFKRACD
DKGIVDLHLH DLRHEATSAL FEAGWQIPEV AAVTGHKDWR NLKRYTNLDP AQVARKGRLK
LVNAA