Gene Bphyt_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1126 
Symbol 
ID6282779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1268016 
End bp1269335 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content69% 
IMG OID642620685 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001894766 
Protein GI187923124 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.820097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGGC CCATTGATTC GCTGTTCGGG CGGCTGGCGC TGCTAGTCGT CGCGGTGCTG 
CTGCTGTCGC ATTTCGCGTG GTACGCGCTC ATGCGCCTCG AGCGCAGTCA ACTGCAAACG
CGCTACGCGG TCGAAGAAGC CACTTTCCTC GTCGACGCGG TGCGTCAGCA CGTCGCCCGG
TCGCCGGATC AGCCCTTGCC GTCGCGCGTC AAACTGGTCG ATCCGGCGAG CCCGGAAGTG
CCGCCGGAGG TCGCGGACAT GCCGCCGCCG CTCGAACGTT TCGTCGAAGA CGCGCGCGAC
CGCATGCCGT CCGGCACGCA GGTGCGCATC GGCCAGCCGG GCCGGCCGCC CACGCTATGG
GTGCGCGCCC CCTCCGACAA AAGCTGGATC GTCGTGCCGG TGCAGCCGTT GCGCACGCCA
CGCTCGCTCG ACCGCACGGT GCTGTGGCTT GCCATCATTT TCTCGTTCGC GGTGATGGCG
GCGCTGTTCG CCGCGTGGGC GCTGCAACAA CCCTTGCGCT CGCTCGCCCA GGCGGTGGCG
CGTTTCGGCC GCGGTCAGCC GGTGCCGCCT GTGCCGGAGC GCGGGCCGCG CGAGTTGCGT
CAACTCACGC ACGGTTTCAA TCAGATGGTC CAGGAAGTGG CGCGCACGGA GAACGATCGC
GCCGTGATGC TGGCGGGCGT GGCGCACGAT CTGAAAACGC CGCTCGCGCG TTTGCGGTTG
CGCGCCGAAA TGATGGACGA AGTGAAGATG CGCGACGGCG TGGTGCGCGA CGTCGATTCC
ATGACGCATA TCGTCGAACA GTTTCTGGTG TTCGCGCACG ACGGCGCCGA TCGCAGCGAG
GCGGTCGAAG TGGACGCGCA GTGCGAGCGG ATCGTACGCA GCTATCGCGC GGTGACCTCC
GGTACACCCA CCGTGCAGAC CGAACTCAAC GCGGGGCCGG CGTTCCTGTT GCCGGCCGCC
ACGCTCGACC GGATTCTGTC GAACCTGCTC GACAACGCGC ATGCCTACGG CGCGCCGCCG
GTCGTCGTGG CCACGGAGCG TACCGCGCAA GGCTTCACTT TGTCGGTGAG CGACAGCGGC
AGCGGCATCG CGGCTCAGGA TCTGATCAAC GCCAGCCGGC CGTTCGTGCG GCTCGATCCC
GCGCGCGGCG GCAATGGCCA TAGCGGCCTG GGGCTCGCCA TTGTCGAGCG GCTGGTGCGG
CGTGCGGGAG GAGAGTGGGA GATCGGCAAC CACGGCGGCC GTGGGTTGCG AGTCTTGATG
AGCTTTCCGC TCGACGTGTT GCCGCGGGTC GCGGCGGCCT CGGAGAGCGC TTGGGGTTGA
 
Protein sequence
MRRPIDSLFG RLALLVVAVL LLSHFAWYAL MRLERSQLQT RYAVEEATFL VDAVRQHVAR 
SPDQPLPSRV KLVDPASPEV PPEVADMPPP LERFVEDARD RMPSGTQVRI GQPGRPPTLW
VRAPSDKSWI VVPVQPLRTP RSLDRTVLWL AIIFSFAVMA ALFAAWALQQ PLRSLAQAVA
RFGRGQPVPP VPERGPRELR QLTHGFNQMV QEVARTENDR AVMLAGVAHD LKTPLARLRL
RAEMMDEVKM RDGVVRDVDS MTHIVEQFLV FAHDGADRSE AVEVDAQCER IVRSYRAVTS
GTPTVQTELN AGPAFLLPAA TLDRILSNLL DNAHAYGAPP VVVATERTAQ GFTLSVSDSG
SGIAAQDLIN ASRPFVRLDP ARGGNGHSGL GLAIVERLVR RAGGEWEIGN HGGRGLRVLM
SFPLDVLPRV AAASESAWG